PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS66375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | Trihelix | ||||||||
Protein Properties | Length: 328aa MW: 37655.1 Da PI: 4.3431 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 38.3 | 3.4e-12 | 104 | 182 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 Wt++e+ L++a e+ + +r++l+ W+ev++k+ +e +er +qC+++++ l+k+ykk+k + +++yf++++ EPS66375.1 104 WTERETFILLNAWGERYLKQGRKSLRSEEWQEVAEKVsQESEVERADTQCRNRLDTLKKKYKKEKMKPAS-------KWVYFKRID 182 *************************************88999**********************998886.......599999987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.0E-19 | 103 | 184 | No hit | No description |
PROSITE profile | PS50090 | 6.179 | 104 | 161 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 7.1E-4 | 104 | 171 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 328 aa Download sequence Send to blast |
DDEEDDEEEE EEEQEGGEDE DDKEEDDDNG GGVQRIGKDG YELGNDNDGD DDFGNMGRHP 60 KKRKLKNLLS NYEFAPRAPP APSALASSSF SKLSHGGRNP LTDWTERETF ILLNAWGERY 120 LKQGRKSLRS EEWQEVAEKV SQESEVERAD TQCRNRLDTL KKKYKKEKMK PASKWVYFKR 180 IDELLLPSTP QQQPPGLSCG VDAGEFIFMN PKVYLDLSNG LDEMRDSPEN SESGGKSMEE 240 DGNAEGTSRS EDSFKILAES IYKFSETYQK IEKSKRQQMV ELDRMRKEFQ RELELQKREI 300 FERAQVEIQK IREGEYDDNE ASGENGSG |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011072329.1 | 1e-121 | trihelix transcription factor ASIL1-like | ||||
Refseq | XP_011072330.1 | 1e-121 | trihelix transcription factor ASIL1-like | ||||
TrEMBL | S8CI61 | 0.0 | S8CI61_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | PGSC0003DMT400080593 | 1e-112 | (Solanum tuberosum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7230 | 24 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24490.1 | 2e-56 | Trihelix family protein |
Publications ? help Back to Top | |||
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