PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66375.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family Trihelix
Protein Properties Length: 328aa    MW: 37655.1 Da    PI: 4.3431
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66375.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.33.4e-12104182286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 Wt++e+  L++a  e+  + +r++l+   W+ev++k+ +e  +er  +qC+++++ l+k+ykk+k    +       +++yf++++
  EPS66375.1 104 WTERETFILLNAWGERYLKQGRKSLRSEEWQEVAEKVsQESEVERADTQCRNRLDTLKKKYKKEKMKPAS-------KWVYFKRID 182
                 *************************************88999**********************998886.......599999987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.0E-19103184No hitNo description
PROSITE profilePS500906.179104161IPR017877Myb-like domain
Gene3DG3DSA:1.10.10.607.1E-4104171IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    Send to blast
DDEEDDEEEE EEEQEGGEDE DDKEEDDDNG GGVQRIGKDG YELGNDNDGD DDFGNMGRHP  60
KKRKLKNLLS NYEFAPRAPP APSALASSSF SKLSHGGRNP LTDWTERETF ILLNAWGERY  120
LKQGRKSLRS EEWQEVAEKV SQESEVERAD TQCRNRLDTL KKKYKKEKMK PASKWVYFKR  180
IDELLLPSTP QQQPPGLSCG VDAGEFIFMN PKVYLDLSNG LDEMRDSPEN SESGGKSMEE  240
DGNAEGTSRS EDSFKILAES IYKFSETYQK IEKSKRQQMV ELDRMRKEFQ RELELQKREI  300
FERAQVEIQK IREGEYDDNE ASGENGSG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011072329.11e-121trihelix transcription factor ASIL1-like
RefseqXP_011072330.11e-121trihelix transcription factor ASIL1-like
TrEMBLS8CI610.0S8CI61_9LAMI; Uncharacterized protein (Fragment)
STRINGPGSC0003DMT4000805931e-112(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA72302431
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-56Trihelix family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]