PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS66301.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | MYB | ||||||||
Protein Properties | Length: 463aa MW: 52949.6 Da PI: 8.9399 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.2 | 3.2e-07 | 110 | 201 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT..............................................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..............................................tWktIartmgkgRtlkqcksrwqk 46 rg W+teE e l ++vkq g +W+ +a++ gRt+++c+sr+++ EPS66301.1 110 RGIWSTEERENLGKGVKQQFQGmllqrsldvlseedgsensgnidhvmlsikdvnitpegmrsflpkvNWEQVAAMYVPGRTGEECQSRFLN 201 788****************999*****************************************************9999***********98 PP | |||||||
2 | Myb_DNA-binding | 28.8 | 2.8e-09 | 209 | 254 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r++WT Ed+ l++ +q G +W Ia+ +g+ Rt+ qc r+q EPS66301.1 209 RDPWTVTEDKNLLHILQQRGLSNWIEIAALLGTSRTPSQCLARYQR 254 789*****************************************96 PP | |||||||
3 | Myb_DNA-binding | 47.4 | 4.3e-15 | 263 | 308 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 W+++Ed+ l av+ +G g+W ++a+ m gRt+ qc +rw+k l EPS66301.1 263 RDWSPQEDDDLRAAVETYGEGNWQLVAAAME-GRTGTQCSNRWLKTL 308 57*****************************.***********9975 PP | |||||||
4 | Myb_DNA-binding | 61.1 | 2.3e-19 | 316 | 360 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 g+W++eEd++l+ av++lG++tWk+Ia++++ gRt qc++rw + EPS66301.1 316 GKWSAEEDKRLKVAVTLLGPKTWKKIASCVP-GRTQVQCRERWVNC 360 79*****************************.***********986 PP | |||||||
5 | Myb_DNA-binding | 46.2 | 1.1e-14 | 369 | 409 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +W+ eEd +l +a++++G W+++a++++ +Rt+++c rw EPS66301.1 369 KWSREEDMKLEEAIALHGHC-WSKVAACIP-NRTDNHCWRRWK 409 8*****************99.*********.***********7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00717 | 0.0059 | 109 | 205 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS50090 | 5.645 | 110 | 201 | IPR017877 | Myb-like domain |
Gene3D | G3DSA:1.10.10.60 | 3.0E-10 | 112 | 128 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 3.0E-10 | 176 | 216 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.65E-17 | 184 | 257 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50090 | 9.593 | 204 | 256 | IPR017877 | Myb-like domain |
SMART | SM00717 | 1.0E-6 | 208 | 258 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 4.7E-8 | 209 | 254 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 1.5E-11 | 217 | 265 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.15E-18 | 242 | 311 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 14.995 | 257 | 308 | IPR017930 | Myb domain |
SMART | SM00717 | 9.3E-14 | 261 | 310 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 6.5E-14 | 263 | 307 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.12E-10 | 265 | 308 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 5.5E-17 | 266 | 310 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 22.317 | 309 | 365 | IPR017930 | Myb domain |
SuperFamily | SSF46689 | 3.22E-26 | 313 | 408 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 9.1E-19 | 314 | 363 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 1.2E-14 | 314 | 363 | IPR001005 | SANT/Myb domain |
Pfam | PF00249 | 1.6E-16 | 316 | 360 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.56E-11 | 317 | 359 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 3.1E-16 | 364 | 411 | IPR009057 | Homeodomain-like |
SMART | SM00717 | 7.4E-11 | 366 | 414 | IPR001005 | SANT/Myb domain |
PROSITE profile | PS51294 | 15.322 | 368 | 416 | IPR017930 | Myb domain |
CDD | cd00167 | 3.31E-9 | 369 | 412 | No hit | No description |
Pfam | PF00249 | 5.8E-13 | 369 | 409 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 463 aa Download sequence Send to blast |
PNSAHAFVDA INENRSYQKL IRNKMMQLEA MIEELEKITE HVKILKDFQV ACKKRTGRAL 60 SQKRDARMQL IALPKPRPKY KSTHKGPPEN PHVAKFRKGM EAFGIFSISR GIWSTEEREN 120 LGKGVKQQFQ GMLLQRSLDV LSEEDGSENS GNIDHVMLSI KDVNITPEGM RSFLPKVNWE 180 QVAAMYVPGR TGEECQSRFL NCEDPLINRD PWTVTEDKNL LHILQQRGLS NWIEIAALLG 240 TSRTPSQCLA RYQRSLNASM LKRDWSPQED DDLRAAVETY GEGNWQLVAA AMEGRTGTQC 300 SNRWLKTLNP TRQRVGKWSA EEDKRLKVAV TLLGPKTWKK IASCVPGRTQ VQCRERWVNC 360 LNPSLNLSKW SREEDMKLEE AIALHGHCWS KVAACIPNRT DNHCWRRWKA LFPDEVVEVE 420 EARKIQKCAL ISNFVDREWE RPALGPADFV MPEKCAVGKS SET |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1h88_C | 3e-29 | 181 | 416 | 2 | 159 | MYB PROTO-ONCOGENE PROTEIN |
1h89_C | 3e-29 | 181 | 416 | 2 | 159 | MYB PROTO-ONCOGENE PROTEIN |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011084456.1 | 0.0 | uncharacterized protein LOC105166700 isoform X1 | ||||
Refseq | XP_020552481.1 | 0.0 | uncharacterized protein LOC105166700 isoform X1 | ||||
Refseq | XP_020552485.1 | 0.0 | uncharacterized protein LOC105166700 isoform X1 | ||||
TrEMBL | S8CNE1 | 0.0 | S8CNE1_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.D01451.1.p | 0.0 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA10876 | 21 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18100.2 | 1e-165 | myb domain protein 4r1 |
Publications ? help Back to Top | |||
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