PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS66147.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 69aa    MW: 7600.81 Da    PI: 11.1166
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS66147.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP226.51.6e-084169234
         AP2  2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslg 34
                 y+GVr ++ +grW AeIrd       r r++lg
  EPS66147.1 41 SYRGVRKRP-WGRWSAEIRDrI----GRCRHWLG 69
                69*******.**********22....24899987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008472.3E-44169IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.8E-104169IPR001471AP2/ERF domain
PROSITE profilePS5103212.9984169IPR001471AP2/ERF domain
SuperFamilySSF541711.24E-64169IPR016177DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 69 aa     Download sequence    Send to blast
PPVILEGIAA VVGERVLFGG CRGKESPVEG DAAGVKTSIK SYRGVRKRPW GRWSAEIRDR  60
IGRCRHWLG
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_022018395.11e-24ethylene-responsive transcription factor ERF084-like
SwissprotQ9M8M57e-20ERF84_ARATH; Ethylene-responsive transcription factor ERF084
TrEMBLS8E1F71e-40S8E1F7_9LAMI; Uncharacterized protein (Fragment)
STRINGGLYMA07G03041.12e-23(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA115522225
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80580.13e-22ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]