PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS65022.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family CPP
Protein Properties Length: 386aa    MW: 42589.9 Da    PI: 8.1332
Description CPP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS65022.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCR44.43.4e-1496133240
         TCR   2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                 +kk+CnCk+s+Clk+YCeCfa++++C+  C+C +C+Nk 
  EPS65022.1  96 RKKHCNCKNSRCLKLYCECFASQTYCDG-CNCMNCHNKL 133
                 689*************************.********96 PP

2TCR50.15.3e-16172211140
         TCR   1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 
                 +++kgC+Ckks ClkkYCeC++a+  Cse+C+C dCkN e
  EPS65022.1 172 QHNKGCHCKKSTCLKKYCECYQANILCSEKCRCLDCKNYE 211
                 589***********************************87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM011145.5E-1695135IPR033467Tesmin/TSO1-like CXC domain
PROSITE profilePS5163434.42496212IPR005172CRC domain
PfamPF036387.5E-1197132IPR005172CRC domain
SMARTSM011147.8E-19172213IPR033467Tesmin/TSO1-like CXC domain
PfamPF036387.5E-12175210IPR005172CRC domain
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MEQSESTAGT LAASPVVRQL DFTGNSANQN GNSILLEHPQ AQLESSLRAL AQANQAHVSA  60
GSRSPPPRFP AQTKTRESPE SQKTNNLEKN DLTPKRKKHC NCKNSRCLKL YCECFASQTY  120
CDGCNCMNCH NKLEFDVHRK EAMAAILERR PDAFRPKIAS SPIGASDRAV EQHNKGCHCK  180
KSTCLKKYCE CYQANILCSE KCRCLDCKNY EGSEERKTHF LHHRPSHSLS SILQPKPVNQ  240
NGFPASNPSV SVLPKCSYRS PLTGILREEH IKDFCNSLVE ASVRSATKNL SDSLFFMSGA  300
EGKERNTTTT TATPCFPLSP VTLSLMCDEH DDGALAEDDP GARRPSGKVD SAPGNDVGIE  360
QERRVLSKFC GFLSDLITRG YVRGNE
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5fd3_A2e-309721811129Protein lin-54 homolog
5fd3_B2e-309721811129Protein lin-54 homolog
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012858010.11e-108PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X2
TrEMBLS8DYH80.0S8DYH8_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.A00224.1.p1e-107(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1933233
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25790.17e-74Tesmin/TSO1-like CXC domain-containing protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]