PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | EPS64966.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 94aa MW: 10087.4 Da PI: 11.0405 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 35.2 | 3e-11 | 1 | 26 | 30 | 55 |
AP2 30 rfslgkfgtaeeAakaaiaarkkleg 55 r++lg+f+taeeAa+a++aa+++l+g EPS64966.1 1 RHWLGTFDTAEEAARAYDAAARRLRG 26 79**********************98 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00380 | 4.4E-6 | 1 | 40 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 2.4E-6 | 1 | 26 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 5.1E-17 | 1 | 34 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 13.828 | 1 | 34 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.25E-12 | 1 | 35 | IPR016177 | DNA-binding domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 94 aa Download sequence Send to blast |
RHWLGTFDTA EEAARAYDAA ARRLRGSKAR TNFQIPSVLP VVPSSASSAS NSSPYQIAAT 60 KKKKSAGKFR NKCSVVTSTA HLFGGYPTVE NKSV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_007217568.2 | 2e-24 | ethylene-responsive transcription factor ERF084 | ||||
TrEMBL | S8CJV1 | 5e-62 | S8CJV1_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | EMJ18767 | 6e-24 | (Prunus persica) |
Publications ? help Back to Top | |||
---|---|---|---|
|