PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS64836.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family Trihelix
Protein Properties Length: 503aa    MW: 56834.2 Da    PI: 6.5412
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS64836.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix84.11.8e-2627111186
    trihelix   1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+++e+ aL+++r++m+ ++r+ + +++plW+evs+k++e g++rs+k+Ckek+en+ k++k++ke+++++   + +++++f+qle
  EPS64836.1  27 RWPREETIALLKIRSDMDVAFRDnTPRRAPLWDEVSRKLSELGYHRSAKKCKEKFENIFKYHKRTKESRSSK--HNARNYRFFEQLE 111
                 8*********************835689******************************************95..67779******97 PP
2trihelix89.83.1e-28322412186
    trihelix   1 rWtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 rW+k+ev aLi+++++++++++ +        k+  Wee+s  +++ g+ r pk+Ckekwen+nk+yk++k+++k+r +e+s+tcpyf+ l+
  EPS64836.1 322 RWPKSEVEALIRLKTDLDSKYQGSGggggggPKGSIWEEISTSLKRLGYDRAPKRCKEKWENINKYYKRVKDSKKRR-PEDSKTCPYFNLLD 412
                 8*********************753344444********************************************97.9*********9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500907.2362085IPR017877Myb-like domain
SMARTSM007170.00422487IPR001005SANT/Myb domain
PfamPF138373.3E-1826111No hitNo description
CDDcd122031.23E-202692No hitNo description
SMARTSM007170.027319387IPR001005SANT/Myb domain
PfamPF138373.5E-21321413No hitNo description
CDDcd122036.72E-20321392No hitNo description
PROSITE profilePS500907.271321385IPR017877Myb-like domain
Sequence ? help Back to Top
Protein Sequence    Length: 503 aa     Download sequence    Send to blast
GGVGGGGGGG EIARGFEEDD RSSSGSRWPR EETIALLKIR SDMDVAFRDN TPRRAPLWDE  60
VSRKLSELGY HRSAKKCKEK FENIFKYHKR TKESRSSKHN ARNYRFFEQL ELLDSHFSNP  120
SNRIPSYSME TTPPTPSGAM PTKALSSGQE FTFPLPDNRV PSVSTSTESS SGKESEGSIK  180
RKRKLVDYFE SLMKDVLEKQ EELQNKFLEA LEKCEKEQIA REEAWKLQEM ARMKREKELL  240
AQERAMSEAK DAAVIAFLQK LTQHTAPLHV PDIILFDKPP ENVGNALEKH SELQENRIGE  300
SSAARLDNST VESTLLMSTS SRWPKSEVEA LIRLKTDLDS KYQGSGGGGG GGPKGSIWEE  360
ISTSLKRLGY DRAPKRCKEK WENINKYYKR VKDSKKRRPE DSKTCPYFNL LDSVYAKKSK  420
KFDGGCSNSN LKPEQILMQL ISQPRDNKKS EERQASVGEY GESDPQNHGE DDEDDEDDDD  480
ENNSGECYQQ IVGNNNLSSS LTS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011099803.10.0trihelix transcription factor GT-2-like
TrEMBLS8CJL00.0S8CJL0_9LAMI; Uncharacterized protein (Fragment)
STRINGevm.model.supercontig_2611.11e-147(Carica papaya)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA97942328
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76880.11e-107Trihelix family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]