PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS64790.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 166aa MW: 18733.2 Da PI: 7.4294 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 40.8 | 4.1e-13 | 11 | 56 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+ErrRR+riN +++Lr++lP +K +Ka+ L +Av+ +++L EPS64790.1 11 SHREAERRRRKRINGHIATLRSILPDV-----TKTDKASLLGEAVRRVREL 56 7*************************8.....8************998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 15.307 | 7 | 56 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.1E-13 | 9 | 59 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.02E-13 | 11 | 65 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.6E-10 | 11 | 56 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 7.1E-12 | 13 | 62 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd04873 | 1.15E-5 | 97 | 161 | No hit | No description |
SuperFamily | SSF55021 | 1.65E-5 | 97 | 162 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 1.6E-6 | 97 | 161 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
AEEEARATND SHREAERRRR KRINGHIATL RSILPDVTKT DKASLLGEAV RRVRELNKAA 60 EELRPSDDAD AFLLPGETDE VKVVEEKNSG RLVMKATLCC QDRPEILTEL RRALKSVEAR 120 VVRAEMSTVG GRTKSVLWVE LNADEERESE DAGMSRLRRA LKGIME |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009605433.1 | 2e-54 | PREDICTED: transcription factor bHLH30-like | ||||
Refseq | XP_009773084.1 | 3e-54 | PREDICTED: transcription factor bHLH30-like isoform X2 | ||||
Refseq | XP_016469430.1 | 3e-54 | PREDICTED: transcription factor bHLH30-like | ||||
Refseq | XP_016492181.1 | 3e-54 | PREDICTED: transcription factor bHLH30-like | ||||
TrEMBL | S8CD13 | 1e-112 | S8CD13_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009605433.1 | 9e-54 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7283 | 22 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41130.1 | 1e-34 | bHLH family protein |
Publications ? help Back to Top | |||
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