PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS64590.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family NF-YC
Protein Properties Length: 113aa    MW: 13349.2 Da    PI: 7.6065
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS64590.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC30.11.1e-09241061698
       NF-YC  16 fknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 
                     ++P+ r+k i+k +    +is ea  l+ +a e f+  ++  ++  a   +++ +    ++++vt+ + f fl d vp+
  EPS64590.1  24 SVLYRFPMNRVKSIIKEEIPDLRISPEAVFLINRASEKFLQLFSKEAYACAFLDRKNHISYHHLSSIVTKRKRFSFLSDFVPE 106
                 555689***********987788****************999999************************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008081.5E-102889IPR003958Transcription factor CBF/NF-Y/archaeal histone domain
Gene3DG3DSA:1.10.20.101.0E-1829106IPR009072Histone-fold
SuperFamilySSF471134.97E-1446107IPR009072Histone-fold
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 113 aa     Download sequence    Send to blast
KKIRVEDDND DEEGDEPEKK KRDSVLYRFP MNRVKSIIKE EIPDLRISPE AVFLINRASE  60
KFLQLFSKEA YACAFLDRKN HISYHHLSSI VTKRKRFSFL SDFVPEMLKA EDA
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011089889.11e-44protein MNN4 isoform X1
TrEMBLS8CCF63e-75S8CCF6_9LAMI; Uncharacterized protein (Fragment)
STRINGXP_009800538.13e-34(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA93041415
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07980.14e-24nuclear factor Y, subunit C10
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]