PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS64189.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 184aa MW: 21384.2 Da PI: 8.4015 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.6 | 6.9e-21 | 69 | 122 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++t+eqle Le+ F+++ +++ e++++LA++lgL+ rq+ vWFqNrRa++k+ EPS64189.1 69 KKRLTTEQLESLENSFQEEVKLDPERKTKLARELGLQPRQIAVWFQNRRARWKN 122 5579************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 121.4 | 4.5e-39 | 68 | 158 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kk+rl++eq+++LE+sF+ee kL+perK++lareLglqprq+avWFqnrRAR+k+kqlE+ y+aLk++y+a+ +e+++L++ev++Lr+ lk EPS64189.1 68 KKKRLTTEQLESLENSFQEEVKLDPERKTKLARELGLQPRQIAVWFQNRRARWKNKQLENLYDALKEEYNAVLREKQKLQQEVTALRALLK 158 9**************************************************************************************8876 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.03E-20 | 54 | 125 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.67 | 63 | 123 | IPR001356 | Homeobox domain |
SMART | SM00389 | 3.3E-19 | 66 | 127 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 3.7E-18 | 68 | 122 | IPR001356 | Homeobox domain |
CDD | cd00086 | 6.87E-17 | 68 | 124 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 7.7E-22 | 70 | 130 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 4.6E-6 | 94 | 103 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 98 | 121 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 4.6E-6 | 103 | 119 | IPR000047 | Helix-turn-helix motif |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 184 aa Download sequence Send to blast |
MDWNNEGFRV PGFVSRPESS FSFLYNYTYD QFPATEMKQV GSIPSGQQML PPLMGTKNCM 60 SMYGQDPKKK RLTTEQLESL ENSFQEEVKL DPERKTKLAR ELGLQPRQIA VWFQNRRARW 120 KNKQLENLYD ALKEEYNAVL REKQKLQQEV TALRALLKDH VTKKQISDIS GEETVESTSI 180 PSSD |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 115 | 123 | RRARWKNKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094442.1 | 2e-86 | putative homeobox-leucine zipper protein ATHB-51 | ||||
Swissprot | Q9LZR0 | 2e-48 | ATB51_ARATH; Putative homeobox-leucine zipper protein ATHB-51 | ||||
TrEMBL | S8CB73 | 1e-134 | S8CB73_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | Migut.J00491.1.p | 1e-83 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3869 | 22 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 7e-51 | homeobox 51 |
Publications ? help Back to Top | |||
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