PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS64070.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 230aa MW: 26056.3 Da PI: 6.7945 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 65.9 | 5.6e-21 | 74 | 127 | 4 | 57 |
-SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 4 RttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++t+eqle Le+ F+++ +++ +++ +LAk+lgL+ rq+ vWFqNrRa++k+ EPS64070.1 74 KKRLTTEQLESLENSFQEDVKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKN 127 5569************************************************95 PP | |||||||
2 | HD-ZIP_I/II | 124.1 | 6.6e-40 | 73 | 163 | 2 | 92 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 kk+rl++eq+++LE+sF+e+ kL+p+rK++la+eLglqprq+avWFqnrRAR+k+kqlE+ y+aLk++yda+++e+++L++ev +Lr+ lk EPS64070.1 73 KKKRLTTEQLESLENSFQEDVKLDPDRKMKLAKELGLQPRQIAVWFQNRRARWKNKQLESLYDALKQEYDAVSREKHKLQQEVMALRAILK 163 9**************************************************************************************8776 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.27E-21 | 54 | 130 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.54 | 68 | 128 | IPR001356 | Homeobox domain |
SMART | SM00389 | 2.3E-20 | 71 | 132 | IPR001356 | Homeobox domain |
CDD | cd00086 | 1.33E-19 | 73 | 129 | No hit | No description |
Pfam | PF00046 | 3.6E-18 | 73 | 127 | IPR001356 | Homeobox domain |
Gene3D | G3DSA:1.10.10.60 | 4.0E-22 | 75 | 135 | IPR009057 | Homeodomain-like |
PRINTS | PR00031 | 6.8E-6 | 99 | 108 | IPR000047 | Helix-turn-helix motif |
PROSITE pattern | PS00027 | 0 | 103 | 126 | IPR017970 | Homeobox, conserved site |
PRINTS | PR00031 | 6.8E-6 | 108 | 124 | IPR000047 | Helix-turn-helix motif |
Pfam | PF02183 | 1.1E-7 | 128 | 162 | IPR003106 | Leucine zipper, homeobox-associated |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence Send to blast |
MDWNGNGSGE CYRLPSFVSR PESSFGFLYN YTTSHDQFSA NGLEMKQPSI STGQMLPSLM 60 GKGCMGIYGQ DPKKKRLTTE QLESLENSFQ EDVKLDPDRK MKLAKELGLQ PRQIAVWFQN 120 RRARWKNKQL ESLYDALKQE YDAVSREKHK LQQEVMALRA ILKDHVTKKQ ISTGGGGGYT 180 DVSGEETVES TSIPSSDVPP RVANQMSEWV NVEDYSNPVM MTPYNWGPLT |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 128 | RRARWKNKQ |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011094442.1 | 1e-101 | putative homeobox-leucine zipper protein ATHB-51 | ||||
TrEMBL | S8CB32 | 1e-172 | S8CB32_9LAMI; Uncharacterized protein | ||||
STRING | Migut.J00491.1.p | 4e-94 | (Erythranthe guttata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA3869 | 22 | 46 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03790.1 | 5e-50 | homeobox 51 |
Publications ? help Back to Top | |||
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