PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS63933.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | Trihelix | ||||||||
Protein Properties | Length: 116aa MW: 12837.2 Da PI: 9.2183 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 60.2 | 5.1e-19 | 40 | 116 | 1 | 60 |
trihelix 1 rWtkqevlaLiearremeerlrrgk.................lkkplWeevskkmrergferspkqCkekwenlnkr 60 +Wt+++v++Li ++ ++++++ +g+ +kk++W++vsk+m+ergf +sp+qC++k+++lnkr EPS63933.1 40 KWTDNMVRLLIMVVYYVGDEVAEGSdrrkggggggggggsamQKKGKWKSVSKAMMERGFFVSPQQCEDKFNDLNKR 116 7*********************998888999999999**************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF13837 | 2.7E-15 | 38 | 116 | No hit | No description |
Sequence ? help Back to Top |
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Protein Sequence Length: 116 aa Download sequence Send to blast |
PFGRTQTASI HSDDDDDNNN GGDEKRKQNS CSSPPWQRMK WTDNMVRLLI MVVYYVGDEV 60 AEGSDRRKGG GGGGGGGGSA MQKKGKWKSV SKAMMERGFF VSPQQCEDKF NDLNKR |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009788508.1 | 3e-41 | PREDICTED: ESF1 homolog | ||||
TrEMBL | S8DLT9 | 4e-80 | S8DLT9_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009788508.1 | 1e-40 | (Nicotiana sylvestris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA6710 | 22 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21200.1 | 2e-27 | sequence-specific DNA binding transcription factors |
Publications ? help Back to Top | |||
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