PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS63910.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 106aa MW: 12458.9 Da PI: 5.8505 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 57.5 | 2.5e-18 | 49 | 98 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h+e E+rRR++iN++f++Lre++P++ ++ +Ka+ L ++++YI+ Lq EPS63910.1 49 RSKHSETEQRRRSKINDRFQKLREIIPNS----EQRRDKASLLLEVIDYIQFLQ 98 899*************************8....79******************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 17.511 | 47 | 97 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 1.96E-18 | 47 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 1.4E-21 | 47 | 105 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 2.10E-11 | 49 | 102 | No hit | No description |
Pfam | PF00010 | 9.7E-16 | 49 | 98 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.5E-13 | 53 | 103 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 106 aa Download sequence Send to blast |
EEEEEEEEEE EMLCMKTEMS SSSSSQPRKV EAKMTTTTAG RQKIPSTSRS KHSETEQRRR 60 SKINDRFQKL REIIPNSEQR RDKASLLLEV IDYIQFLQHK VSKLEG |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Positive brassinosteroid-signaling protein. Transcription factor that bind specifically to the DNA sequence 5'-CANNTG-3'(E box). Can bind individually to the promoter as a homodimer or synergistically as a heterodimer with BZR2/BES1. Does not itself activate transcription but enhances BZR2/BES1-mediated target gene activation. {ECO:0000269|PubMed:15680330}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Repressed by cold treatment. {ECO:0000269|PubMed:12679534}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010546220.1 | 2e-28 | PREDICTED: transcription factor BIM1 isoform X1 | ||||
Refseq | XP_010546221.1 | 2e-28 | PREDICTED: transcription factor BIM1 isoform X1 | ||||
Refseq | XP_010546222.1 | 2e-28 | PREDICTED: transcription factor BIM1 isoform X2 | ||||
Refseq | XP_010546223.1 | 2e-28 | PREDICTED: transcription factor BIM1 isoform X3 | ||||
Refseq | XP_010546225.1 | 2e-28 | PREDICTED: transcription factor BIM1 isoform X4 | ||||
Swissprot | Q9LEZ3 | 1e-25 | BIM1_ARATH; Transcription factor BIM1 | ||||
TrEMBL | S8CAP2 | 8e-69 | S8CAP2_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_010546220.1 | 8e-28 | (Tarenaya hassleriana) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA8947 | 18 | 21 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69010.1 | 3e-27 | BES1-interacting Myc-like protein 2 |
Publications ? help Back to Top | |||
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