PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS63873.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 377aa    MW: 41760.1 Da    PI: 10.3809
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS63873.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-18653253
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkl 53
                +++GVr++  +g+WvAeIr+p        kr++lg+f tae Aa+a+++a+  +
  EPS63873.1  6 KFRGVRQRQ-WGSWVAEIRHP-----LlkKRIWLGTFETAEAAARAYDQAAVVM 53
                89****999.**********8.....335*********************9766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.26E-20564No hitNo description
Gene3DG3DSA:3.30.730.102.6E-31663IPR001471AP2/ERF domain
PROSITE profilePS5103222.181663IPR001471AP2/ERF domain
PfamPF008475.3E-11650IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-20664IPR016177DNA-binding domain
SMARTSM003802.5E-36669IPR001471AP2/ERF domain
PRINTSPR003676.7E-10718IPR001471AP2/ERF domain
PRINTSPR003676.7E-102945IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MVQAAKFRGV RQRQWGSWVA EIRHPLLKKR IWLGTFETAE AAARAYDQAA VVMSGQNAKT  60
NFPAGGVGEA ATSASEILGA KLKKCCKNPA PSITCLRLDN DDSNIGVWQK RAGRHSGSHW  120
VMKVELKNKT KKNDVTPPLS SSDTSSSVSS DEENRIAMQM DLRNLREQLY AAAECLESSY  180
DDTQEHKKYL LESSKDYVER AVVSTVDHLG SLADKLSAML DANATQFSAT LFSIEQQLSA  240
FHRLTSLGGM SELSLILQPM RHHKHYARGG DGLPLPVQVV NGDGIQNNAA ASAGHFDFTK  300
SIPSKKTVRR SISPFRFPLR RSESGDDGGR STSPNPSQRH RRSVSAFRRS ERKDETSTRT  360
RSMQLFKAMV TVHKRDV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-155631372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLS8DLN30.0S8DLN3_9LAMI; Uncharacterized protein
STRINGXP_008804592.17e-63(Phoenix dactylifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11190.13e-49ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]