PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS63689.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | Trihelix | ||||||||
Protein Properties | Length: 148aa MW: 16706.9 Da PI: 10.7727 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 40 | 1e-12 | 105 | 144 | 1 | 40 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmre 40 rW++qe+l+L+e+r++++ +++++++k+plW+e+s+++ + EPS63689.1 105 RWPRQETLTLLEIRSRLDPKFKEANQKGPLWDEISRFVIQ 144 8***********************************9976 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 148 aa Download sequence Send to blast |
MRFTSLNRPH HHPKIRTPPP FSKKKGEKEE RRRNTIRFSR ARSEMDDDQY GISDLRHFIS 60 GRSLFPSPEI LADHRCVVSQ PAAVGGGGFD VVGVNSGGGD GGTGRWPRQE TLTLLEIRSR 120 LDPKFKEANQ KGPLWDEISR FVIQISLS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_022864074.1 | 2e-27 | trihelix transcription factor PTL-like | ||||
TrEMBL | S8C9T0 | 1e-104 | S8C9T0_9LAMI; Uncharacterized protein | ||||
STRING | XP_002528594.1 | 7e-25 | (Ricinus communis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA19695 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03680.1 | 3e-18 | Trihelix family protein |
Publications ? help Back to Top | |||
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