PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS59764.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 161aa MW: 17699.5 Da PI: 5.861 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59 | 7.9e-19 | 109 | 161 | 2 | 54 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRak 54 rk+ +++k+q Le+ F+++++++ ++++eLA++l+Lt rqV vWFqNrRa+ EPS59764.1 109 RKKLRLSKSQSALLEQSFKQHSTLNPTQKQELARELKLTPRQVEVWFQNRRAR 161 678899*********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 77.7 | 1.9e-25 | 109 | 161 | 1 | 53 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRAR 53 +kk+rlsk q++lLE+sF+++++L+p++K+elareL+l+prqv+vWFqnrRAR EPS59764.1 109 RKKLRLSKSQSALLEQSFKQHSTLNPTQKQELARELKLTPRQVEVWFQNRRAR 161 69**************************************************9 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 7.27E-18 | 99 | 161 | IPR009057 | Homeodomain-like |
PROSITE profile | PS50071 | 17.637 | 105 | 161 | IPR001356 | Homeobox domain |
SMART | SM00389 | 8.2E-10 | 107 | 161 | IPR001356 | Homeobox domain |
Pfam | PF00046 | 3.6E-16 | 109 | 161 | IPR001356 | Homeobox domain |
CDD | cd00086 | 3.72E-17 | 109 | 161 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 9.7E-18 | 114 | 161 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence Send to blast |
GFDDLCNLGL GITAAAAGEG CDVSRNKPPP PLLEPSLTLS LSGENYDLFR KAVSDERRSS 60 LDVHGQDSGA ASSFSSVKRE REIGGGDEAE VERVSSRLSD EEDDGSNGRK KLRLSKSQSA 120 LLEQSFKQHS TLNPTQKQEL ARELKLTPRQ VEVWFQNRRA R |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor. {ECO:0000250}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011099420.1 | 3e-58 | homeobox-leucine zipper protein HAT22-like | ||||
Swissprot | P46604 | 3e-35 | HAT22_ARATH; Homeobox-leucine zipper protein HAT22 | ||||
TrEMBL | S8BZA7 | 1e-112 | S8BZA7_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | VIT_00s0732g00010.t01 | 3e-49 | (Vitis vinifera) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G37790.1 | 2e-32 | HD-ZIP family protein |
Publications ? help Back to Top | |||
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