PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS59668.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | ERF | ||||||||
Protein Properties | Length: 164aa MW: 18017.8 Da PI: 6.6813 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.1 | 3.8e-17 | 12 | 63 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV +++ +grW+A+I + g +k+ +lg++ t eeAa a++ a+ +++g EPS59668.1 12 SKYRGVARHHHNGRWEARIGRvF---G-NKYLYLGTYATQEEAAMAYDMAAIEYRG 63 89****99**********99966...3.6*************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00847 | 3.7E-13 | 12 | 63 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 1.57E-18 | 12 | 73 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 4.05E-23 | 12 | 73 | No hit | No description |
PROSITE profile | PS51032 | 18.36 | 13 | 71 | IPR001471 | AP2/ERF domain |
SMART | SM00380 | 8.7E-25 | 13 | 77 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 2.4E-18 | 13 | 71 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.7E-5 | 14 | 25 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 9.7E-5 | 53 | 73 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence Send to blast |
RRKSSGFARG VSKYRGVARH HHNGRWEARI GRVFGNKYLY LGTYATQEEA AMAYDMAAIE 60 YRGLNAVTNF DVNHYVAAAA AAKDDSGGSS DSGGIPVNAS KLKEIRTALR RSSPSSSSDP 120 EPEPPRRCFP DDIQTSFDFQ DSSDLADDHE VIFGSYDAFV PSIF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011082628.1 | 1e-63 | AP2-like ethylene-responsive transcription factor At1g16060 isoform X2 | ||||
Swissprot | Q94AN4 | 2e-48 | AP2L1_ARATH; AP2-like ethylene-responsive transcription factor At1g16060 | ||||
TrEMBL | S8DAE8 | 1e-117 | S8DAE8_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009621695.1 | 4e-61 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA1815 | 24 | 64 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G79700.2 | 3e-47 | AP2 family protein |
Publications ? help Back to Top | |||
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