PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS58619.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family ERF
Protein Properties Length: 426aa    MW: 45900.3 Da    PI: 4.9587
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS58619.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP250.64.8e-16197244253
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkl 53 
                 +++GVr++k +g+W+AeIrdp    +r kr++lg+f t  eA  a+++ r+++
  EPS58619.1 197 RFRGVRQRK-WGKWAAEIRDP----IRrKRVWLGTFKTQIEASNAYEKKRLEF 244
                 59******9.**********7....246**********************986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.105.1E-20197243IPR001471AP2/ERF domain
SMARTSM003805.6E-16197251IPR001471AP2/ERF domain
PROSITE profilePS5103218.465197259IPR001471AP2/ERF domain
SuperFamilySSF541712.09E-14197244IPR016177DNA-binding domain
CDDcd000188.34E-19197249No hitNo description
PfamPF008475.1E-10197245IPR001471AP2/ERF domain
PRINTSPR003674.5E-8198209IPR001471AP2/ERF domain
PRINTSPR003674.5E-8220236IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 426 aa     Download sequence    Send to blast
MGSGQWKKSE RGRRRKEGVS WGYYGLGAGA GTVLCTRKSC FCCCPGACAY LPGDFSAVGF  60
SRADPKIFAT ASMRLRPRSE IIWSENMPPA SPVLQSRKGK VKPEQQQQPT KRVRIVCSDP  120
YATDASDEDD DGKQRGLKKT KRVVFEVCLS GGNGGVAASE HTEISFDGSH SGGEKSVSNL  180
KKVVSSGETK ANPATGRFRG VRQRKWGKWA AEIRDPIRRK RVWLGTFKTQ IEASNAYEKK  240
RLEFDALYNG GVGGGVSSPE EESPAGCFLA ESKQKDKSMP RISLSEGSTD REGSTDSVGS  300
SSVLELDSTV SVNPPPPSAA AIDEKETATD PMLTSFASQF GQDLDLGLEL QSIIAGCDDI  360
FPPSLDEFFD DLPIGGDLEN DIELPNFDFD VDFDESTLAW IDSTVQQPQP LIAAGAPAAS  420
LNIACL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011076896.11e-57ethylene-responsive transcription factor ERF118
TrEMBLS8BW740.0S8BW74_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA29572351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.28e-28ERF family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]