PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EPS57728.1
Organism
Genlisea aurea
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
Family bHLH
Protein Properties Length: 145aa    MW: 16697.9 Da    PI: 10.4729
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EPS57728.1genomeLSMUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.84e-131158254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                 r+h + E+ RR  +N+++e L++l+P++     +K + a+++  A++YI++L
  EPS57728.1 11 NRKHFATEKHRRVLLNDKYEALKKLIPNP-----TKTDRASTVADAINYIQEL 58
                578**************************.....9****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474593.27E-14970IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.919958IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.0E-101258IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-121268IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.18E-81263No hitNo description
SMARTSM003532.5E-101564IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    Send to blast
MADCCMVRNR NRKHFATEKH RRVLLNDKYE ALKKLIPNPT KTDRASTVAD AINYIQELKR  60
TVAELKVLLE KKRAARERRR SDDENRHVTT VAAPIQGDND ACNNGDSSSS SSLRTSWLQR  120
KSKHTEVDVR IIDDEVTVKV VQQKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831429.12e-48PREDICTED: transcription factor bHLH91-like isoform X1
RefseqXP_012831430.12e-48PREDICTED: transcription factor bHLH91-like isoform X2
RefseqXP_019192633.13e-48PREDICTED: transcription factor bHLH91-like
RefseqXP_019192641.13e-48PREDICTED: transcription factor bHLH91-like
RefseqXP_019192647.13e-48PREDICTED: transcription factor bHLH91-like
SwissprotQ9LND03e-33BH089_ARATH; Transcription factor bHLH89
TrEMBLS8D4V91e-101S8D4V9_9LAMI; Uncharacterized protein (Fragment)
STRINGMigut.N01685.1.p1e-47(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA26962351
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G06170.23e-29bHLH family protein
Publications ? help Back to Top
  1. Leushkin EV, et al.
    The miniature genome of a carnivorous plant Genlisea aurea contains a low number of genes and short non-coding sequences.
    BMC Genomics, 2013. 14: p. 476
    [PMID:23855885]
  2. Cui J, et al.
    Feedback Regulation of DYT1 by Interactions with Downstream bHLH Factors Promotes DYT1 Nuclear Localization and Anther Development.
    Plant Cell, 2016. 28(5): p. 1078-93
    [PMID:27113773]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]