PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EPS57585.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lentibulariaceae; Genlisea
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Family | bHLH | ||||||||
Protein Properties | Length: 157aa MW: 17239 Da PI: 8.5007 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 33.9 | 5.5e-11 | 9 | 52 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h+e+ErrRR+riN +++L+++lP+ +Ka+ L +Av+ +++L EPS57585.1 9 NSHKEAERRRRKRINAHISTLKSILPNT--------DKASLLGEAVRRVREL 52 68*************************7........6888888888877766 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50888 | 9.693 | 6 | 52 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 2.3E-8 | 9 | 52 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF47459 | 4.45E-11 | 9 | 65 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 4.7E-11 | 10 | 54 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.4E-8 | 12 | 58 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SuperFamily | SSF55021 | 4.12E-5 | 91 | 155 | No hit | No description |
Gene3D | G3DSA:3.30.70.260 | 2.4E-5 | 92 | 154 | No hit | No description |
CDD | cd04873 | 0.00631 | 92 | 153 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence Send to blast |
ESKAFAASNS HKEAERRRRK RINAHISTLK SILPNTDKAS LLGEAVRRVR ELNKAAAELL 60 DDETPLKVLF PSEADEVKVS PVEEEEGLVK ATMCCEDRPE MVVDLIKALK SVEAKVVKAE 120 MSTMGGRTKS VLWVQLNVGC ESDVGLATLR RALKGVV |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011097486.2 | 5e-60 | transcription factor bHLH30-like | ||||
Swissprot | Q9S7Y1 | 2e-30 | BH030_ARATH; Transcription factor bHLH30 | ||||
TrEMBL | S8BSM2 | 1e-107 | S8BSM2_9LAMI; Uncharacterized protein (Fragment) | ||||
STRING | XP_009605433.1 | 2e-49 | (Nicotiana tomentosiformis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA7283 | 22 | 31 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56770.1 | 3e-33 | bHLH family protein |
Publications ? help Back to Top | |||
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