PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_33888_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 295aa MW: 32151.3 Da PI: 9.9921 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21.6 | 4.8e-07 | 206 | 268 | 4 | 58 |
XCHHHCHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKk........aeieeLeekvkeLeaeNkaLkkeleelkkevak 58 +++rr++kNRe+A rsR+RK+ a++ eLe v +Le+e +L e el+k k Cotton_A_33888_BGI-A2_v1.0 206 QQKQRRMIKNRESAARSRERKQagflfsksAYTVELESLVTQLEEEKARLLREEAELNKARFK 268 689*****************994444444459*****************99888888887654 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.9E-12 | 201 | 271 | No hit | No description |
SMART | SM00338 | 3.2E-8 | 203 | 275 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 6.13E-19 | 207 | 265 | No hit | No description |
SuperFamily | SSF57959 | 4.08E-5 | 207 | 265 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 210 | 225 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 295 aa Download sequence Send to blast |
MASSKVITTT SQTNPDLPRQ PSLCPSLSTL LADLQNQQNN QNQSQNGLGS MNMDDLLKNI 60 CSSPPPPPPT SDAHPQFAGV SISREGSFSL PKDVANKSVD EVWKDIVVGG DDQRQGNPPV 120 GMTLEDFLTK AGAVREEDVR GVANQVGVGA GVYPVDPAVI NGGGNHFSAF GNSGGVDHQR 180 LVAVAGGGAR GKRRAVEAPP LDKATQQKQR RMIKNRESAA RSRERKQAGF LFSKSAYTVE 240 LESLVTQLEE EKARLLREEA ELNKARFKQL MENLVPVVEK RRPPRVLRRV HSMQW |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016711655.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4 | ||||
Refseq | XP_017616076.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4 | ||||
TrEMBL | A0A2P5YJZ9 | 0.0 | A0A2P5YJZ9_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.002G207000.1 | 1e-173 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM16538 | 6 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41070.3 | 1e-17 | bZIP family protein |