PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_33888_BGI-A2_v1.0
Organism
Gossypium arboreum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 295aa    MW: 32151.3 Da    PI: 9.9921
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_33888_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.64.8e-07206268458
                                 XCHHHCHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1   4 lkrerrkqkNReAArrsRqRKk........aeieeLeekvkeLeaeNkaLkkeleelkkevak 58 
                                  +++rr++kNRe+A rsR+RK+        a++ eLe  v +Le+e  +L  e  el+k   k
  Cotton_A_33888_BGI-A2_v1.0 206 QQKQRRMIKNRESAARSRERKQagflfsksAYTVELESLVTQLEEEKARLLREEAELNKARFK 268
                                 689*****************994444444459*****************99888888887654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.9E-12201271No hitNo description
SMARTSM003383.2E-8203275IPR004827Basic-leucine zipper domain
CDDcd147076.13E-19207265No hitNo description
SuperFamilySSF579594.08E-5207265No hitNo description
PROSITE patternPS000360210225IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    Send to blast
MASSKVITTT SQTNPDLPRQ PSLCPSLSTL LADLQNQQNN QNQSQNGLGS MNMDDLLKNI  60
CSSPPPPPPT SDAHPQFAGV SISREGSFSL PKDVANKSVD EVWKDIVVGG DDQRQGNPPV  120
GMTLEDFLTK AGAVREEDVR GVANQVGVGA GVYPVDPAVI NGGGNHFSAF GNSGGVDHQR  180
LVAVAGGGAR GKRRAVEAPP LDKATQQKQR RMIKNRESAA RSRERKQAGF LFSKSAYTVE  240
LESLVTQLEE EKARLLREEA ELNKARFKQL MENLVPVVEK RRPPRVLRRV HSMQW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016711655.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4
RefseqXP_017616076.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 4
TrEMBLA0A2P5YJZ90.0A0A2P5YJZ9_GOSBA; Uncharacterized protein
STRINGGorai.002G207000.11e-173(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM16538611
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G41070.31e-17bZIP family protein