PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_32584_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 188aa MW: 21841.7 Da PI: 10.9836 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 33.6 | 8.4e-11 | 79 | 135 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 ++ rr+++NRe+ArrsR RK++ +e+L++ + L eN++L +l l ++ ++++ Cotton_A_32584_BGI-A2_v1.0 79 RKRRRMISNRESARRSRMRKQKHLENLRNQANRLRIENRELTYRLRFLLYHCHRVRT 135 5789*************************************9998877777776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.0E-11 | 75 | 139 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.1E-8 | 77 | 132 | No hit | No description |
PROSITE profile | PS50217 | 10.576 | 77 | 140 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 4.1E-8 | 79 | 134 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.65E-10 | 79 | 129 | No hit | No description |
CDD | cd14702 | 6.72E-18 | 80 | 131 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 82 | 97 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MLSTVPAIIS SNPMMESDPF PSLQSAWDCS QLFSTTQSVG PARSGSASTE LNQTQTQTQT 60 HSNSGLDESN KTLSIIDERK RRRMISNRES ARRSRMRKQK HLENLRNQAN RLRIENRELT 120 YRLRFLLYHC HRVRTDNDRL RSESTLLRQK LSDMHQNLLF KQLQQFSSAW PCNNVTVMSE 180 QIPPPLII |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 78 | 82 | RKRRR |
2 | 78 | 99 | RKRRRMISNRESARRSRMRKQK |
3 | 91 | 98 | RRSRMRKQ |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017635767.1 | 1e-136 | PREDICTED: bZIP transcription factor 44-like | ||||
TrEMBL | A0A1U8MLA8 | 1e-129 | A0A1U8MLA8_GOSHI; basic leucine zipper 43-like | ||||
STRING | Gorai.008G085300.1 | 1e-118 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM3338 | 26 | 65 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 4e-32 | basic leucine-zipper 6 |