PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_27567_BGI-A2_v1.0
Common NameF383_00515
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 316aa    MW: 35347.7 Da    PI: 6.8169
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_27567_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_150.83.6e-16246295555
                                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                                 +r++r++kNRe+A rsR+RK+a++ eLe+kv  Le+eN++L+ + +el k+
  Cotton_A_27567_BGI-A2_v1.0 246 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLR-KQKELDKM 295
                                 79****************************************.55666666 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.2E-15237289No hitNo description
SMARTSM003385.2E-13242314IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.76244289IPR004827Basic-leucine zipper domain
CDDcd147071.91E-24246300No hitNo description
PfamPF001701.6E-13246290IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.25E-11246291No hitNo description
PROSITE patternPS000360249264IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MGSQGDGGSN GKQLQCQPIT RQNSMYSLTL DEVQNQLGDL GKPLNSMNLD ELLKNVWTLE  60
ANQTLGTETE GTAVTNQTSL QRQASLSLTS ALSKKTVDEV WKDIQQNKID GEKKSRERQP  120
TLGEMTLEDF LVKAGVVDEA SNDENARPIA GVDLSVAPQF AQQGQWMQYP QQPQYHHPQQ  180
SIMGVYMPGQ PMPQPLAIGT TGVMDVSYPE NQLALPSPLM GTLSDTQTSG RKRGAHEDIV  240
EKTVERRQKR MIKNRESAAR SRARKQAYTN ELENKVSRLE EENERLRKQK ELDKMLPSAP  300
PPEPKYQLRR TSSAPF
Functional Description ? help Back to Top
Source Description
UniProtBinds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00409DAPTransfer from AT3G56850Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP9382990.0KP938299.1 Gossypium hirsutum strain KK1543 bZIP transcription factor (bZIP15) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017603194.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2
SwissprotQ9LES31e-102AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLA0A0B0PNW60.0A0A0B0PNW6_GOSAR; Abscisic acid-insensitive 5-like protein 2
STRINGGorai.009G301400.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM18842883
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.13e-88ABA-responsive element binding protein 3
Publications ? help Back to Top
  1. Kim H, et al.
    ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis.
    Plant Mol. Biol., 2016. 90(3): p. 303-15
    [PMID:26667153]
  2. Song C,Kim T,Chung WS,Lim CO
    The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions.
    Mol. Cells, 2017. 40(8): p. 577-586
    [PMID:28756655]