PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_27567_BGI-A2_v1.0 | ||||||||
Common Name | F383_00515 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 316aa MW: 35347.7 Da PI: 6.8169 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 50.8 | 3.6e-16 | 246 | 295 | 5 | 55 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r++r++kNRe+A rsR+RK+a++ eLe+kv Le+eN++L+ + +el k+ Cotton_A_27567_BGI-A2_v1.0 246 RRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENERLR-KQKELDKM 295 79****************************************.55666666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.2E-15 | 237 | 289 | No hit | No description |
SMART | SM00338 | 5.2E-13 | 242 | 314 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.76 | 244 | 289 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 1.91E-24 | 246 | 300 | No hit | No description |
Pfam | PF00170 | 1.6E-13 | 246 | 290 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 6.25E-11 | 246 | 291 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 249 | 264 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 316 aa Download sequence Send to blast |
MGSQGDGGSN GKQLQCQPIT RQNSMYSLTL DEVQNQLGDL GKPLNSMNLD ELLKNVWTLE 60 ANQTLGTETE GTAVTNQTSL QRQASLSLTS ALSKKTVDEV WKDIQQNKID GEKKSRERQP 120 TLGEMTLEDF LVKAGVVDEA SNDENARPIA GVDLSVAPQF AQQGQWMQYP QQPQYHHPQQ 180 SIMGVYMPGQ PMPQPLAIGT TGVMDVSYPE NQLALPSPLM GTLSDTQTSG RKRGAHEDIV 240 EKTVERRQKR MIKNRESAAR SRARKQAYTN ELENKVSRLE EENERLRKQK ELDKMLPSAP 300 PPEPKYQLRR TSSAPF |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | KP938299 | 0.0 | KP938299.1 Gossypium hirsutum strain KK1543 bZIP transcription factor (bZIP15) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017603194.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X2 | ||||
Swissprot | Q9LES3 | 1e-102 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A0B0PNW6 | 0.0 | A0A0B0PNW6_GOSAR; Abscisic acid-insensitive 5-like protein 2 | ||||
STRING | Gorai.009G301400.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1884 | 28 | 83 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-88 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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