PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_26285_BGI-A2_v1.0
Common NameF383_06801
Organism
Gossypium arboreum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 391aa    MW: 43290.9 Da    PI: 10.2084
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_26285_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.27.6e-13307358556
                                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                                 +r+rr++kNRe+A rsR+RK+a++ eLe +  +L++eN +Lk+ +ee +++ 
  Cotton_A_26285_BGI-A2_v1.0 307 RRQRRMIKNRESAARSRARKQAYTVELELELNQLKQENAKLKQLVEENEQKR 358
                                 69************************************98884444443333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.3E-10303369IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.921305357IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.8E-12306358No hitNo description
CDDcd147071.04E-23307354No hitNo description
PfamPF001703.4E-10307359IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-10307356No hitNo description
PROSITE patternPS000360310325IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 391 aa     Download sequence    Send to blast
MALFASESVA YGGIKAASPS QAPRSPQQQQ RQELTQDQSV SSLNKQGSIF SLTLDEIQLK  60
SGKAFGSMNM DEFLANLWNV EENQAPPQLD QNEARDDKDK GKGGQPTLAR QGSFSIPTPL  120
CKKTVDEVWF EIQKELPQQR KANNIADHEP PQRQQTFGEM TLEDFLIKAG VVQEPSSASS  180
QQKKVASTRT NGTSLEATYG MGHGAGSSQQ KMLTSIQNSS ASLDANFGMG HVMGLGFPGH  240
QIVPSNLAAP GNGYAAAYPI FTQSKTMMGE SSNVAENGNG TNRLLEPVVI QNKKRIIDGP  300
PEVVVERRQR RMIKNRESAA RSRARKQAYT VELELELNQL KQENAKLKQL VEENEQKRKQ  360
EVLKRKQSKL PAQRKVVDKM RTLRRTVSLG W
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017608423.10.0PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLA0A0B0PST60.0A0A0B0PST6_GOSAR; Abscisic acid-insensitive 5-like protein 1
STRINGGorai.006G111600.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM116522230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.15e-61bZIP family protein