PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_24473_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 118aa MW: 13495.5 Da PI: 10.2648 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.8 | 1.7e-11 | 37 | 92 | 1 | 57 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 e+e k+ + k+kNR++A +sR+R ++ + Leekv++L +eN aL k+l +l+ +a Cotton_A_24473_BGI-A2_v1.0 37 EAEQKKRKNKIKNRISAAKSRARSQENTRFLEEKVEQLRNEN-ALLKKLLSLETAAA 92 67899*************************************.57778888887665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 3.9E-10 | 34 | 90 | No hit | No description |
Pfam | PF00170 | 1.8E-8 | 37 | 87 | IPR004827 | Basic-leucine zipper domain |
SMART | SM00338 | 3.9E-4 | 37 | 108 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.565 | 39 | 83 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.5E-8 | 41 | 89 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 44 | 59 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence Send to blast |
MQVLAADAPS GSGELLIMND LPVYKRGRNK IQEAIKEAEQ KKRKNKIKNR ISAAKSRARS 60 QENTRFLEEK VEQLRNENAL LKKLLSLETA AAERLPEERE VMQGKKAKQC LEPEEQHT |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016665725.1 | 4e-65 | PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like isoform X3 | ||||
Refseq | XP_016665726.1 | 4e-65 | PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5-like isoform X3 | ||||
Refseq | XP_017613654.1 | 6e-65 | PREDICTED: cyclic AMP-dependent transcription factor ATF-3-like | ||||
TrEMBL | A0A1U8HI40 | 8e-64 | A0A1U8HI40_GOSHI; protein ABSCISIC ACID-INSENSITIVE 5-like isoform X3 | ||||
STRING | Gorai.009G085700.1 | 1e-46 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM35750 | 2 | 2 |