PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_21139_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 398aa MW: 43657.5 Da PI: 6.9469 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.8 | 1.3e-09 | 209 | 265 | 5 | 61 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 kr++r NR +A rs +RK +i+eLe+kv++L++e ++L +l + l++ Cotton_A_21139_BGI-A2_v1.0 209 KRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLVQRDTNGLTA 265 9****************************************9999877766666655 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.9E-15 | 205 | 269 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.599 | 207 | 270 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.3E-10 | 209 | 262 | No hit | No description |
SuperFamily | SSF57959 | 1.62E-10 | 209 | 260 | No hit | No description |
Pfam | PF00170 | 2.3E-8 | 209 | 257 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14703 | 3.07E-24 | 210 | 259 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 398 aa Download sequence Send to blast |
MEKDKSPGLL PPSGRFPGFS SPGIAPNNFN PKTEKGSFGQ TSENNHFSHD ISKMPDNPPK 60 KLGHRRAHSE ILTLPDDISF DSDTGIVGAA DGPSYSDEAE DDLFSIYLDM DKFNSSSATS 120 TCQVGESSEA AAPVAVPAKS GLSSGENISN GIGSSMKPRV RHQHSQSMDG STSIKPEMLM 180 SGSEEVSPAD SKKAMSAANL AELALIDPKR AKRIWANRQS AARSKERKMR YIAELERKVQ 240 TLQTEATSLS AQLTLVQRDT NGLTAENSEL KLRLQAMEQQ VHLQDALNDA MKEEIWHLKM 300 LTVQSMPNGG GIMNFASFGA SQHYYPNNHA KHTLLAAQQF QQLQIHSQKH QHQHQHQFAP 360 HQLHHQQEQT GEMRARGSMP SPNQKDSSLD VNSTASKD |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Putative transcription factor with an activatory role. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017646932.1 | 0.0 | PREDICTED: probable transcription factor PosF21 | ||||
Swissprot | Q04088 | 1e-147 | POF21_ARATH; Probable transcription factor PosF21 | ||||
TrEMBL | A0A1U8IHZ6 | 0.0 | A0A1U8IHZ6_GOSHI; probable transcription factor PosF21 | ||||
STRING | Gorai.011G140400.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM2445 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06070.1 | 1e-145 | bZIP family protein |
Publications ? help Back to Top | |||
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