PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_20714_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 189aa MW: 21810.9 Da PI: 8.2466 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30.2 | 9.7e-10 | 117 | 163 | 1 | 47 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 e++ k+e k+kNReAA r + Kka+i+ Le +v+++ ++N ++k Cotton_A_20714_BGI-A2_v1.0 117 EAAEKKELHKIKNREAAARAFEEKKAYIKWLEVEVEKFRKKNADMKR 163 6778****************************************995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF00170 | 4.7E-8 | 118 | 163 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 3.9E-7 | 121 | 163 | No hit | No description |
SuperFamily | SSF57959 | 6.12E-6 | 121 | 164 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 189 aa Download sequence Send to blast |
MEQLKNEDEF CGQRAQHLDM KLLLQDDDAF ESIFFPPTLL DYNLTNINEL IDFDELHSIL 60 NEGEVNQGHD QGGSCHGSTT TMVTTAELMN VKPKLNNEQH VIKKWRTRKR LERGSKEAAE 120 KKELHKIKNR EAAARAFEEK KAYIKWLEVE VEKFRKKNAD MKRLLLVLGS SIGSDMARKQ 180 LRRTASGLL |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | JX582077 | 2e-67 | JX582077.1 Gossypium hirsutum clone NBRI_GE14853 microsatellite sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016711828.1 | 1e-134 | PREDICTED: uncharacterized protein LOC107925633 | ||||
TrEMBL | A0A2P5X7I6 | 1e-135 | A0A2P5X7I6_GOSBA; Uncharacterized protein | ||||
STRING | EOX95176 | 2e-46 | (Theobroma cacao) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM28107 | 2 | 2 |