PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_19573_BGI-A2_v1.0
Common NameF383_02895
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 425aa    MW: 45168 Da    PI: 5.917
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_19573_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-14213267357
                                 XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                                 + kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L ae ++L k+l   + +++
  Cotton_A_19573_BGI-A2_v1.0 213 DAKRARRMRSNRESARRSRRRKQAQMNELETQVGQLRAEHSSLLKRLTDTNHKYD 267
                                 68*****************************************988877776665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.7E-11209262No hitNo description
SMARTSM003381.8E-17211275IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.024213259IPR004827Basic-leucine zipper domain
PfamPF001703.1E-12214267IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.04E-10215264No hitNo description
PROSITE patternPS000360218233IPR004827Basic-leucine zipper domain
PfamPF124984.1E-19282390IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0002240Biological Processresponse to molecule of oomycetes origin
GO:0009626Biological Processplant-type hypersensitive response
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 425 aa     Download sequence    Send to blast
MNSVFSVDDF SDPFWAASAT GAAAGMSRSQ SEWALEKFLE EFSGAGAAIQ GSRAGENVIG  60
TSLAVPQAPV SKSENGDGDG GAVEVKKPNN LNPPPSDSTP TVPIDADEYR AILKNKLHQA  120
CAAVALSRAS AVKAEGSSAQ AENQALQSGS DVQGSSKTQE QGEPDAGISA VSTTQKKPGT  180
QMRQATSGSS REDSDDGELE GDTETTENMD PADAKRARRM RSNRESARRS RRRKQAQMNE  240
LETQVGQLRA EHSSLLKRLT DTNHKYDEAA VDNRILKADI ETLRAKVKMA EETVKRVTGI  300
NPVLLSRPSV PTVPVPFVSS PLESSTGSVP LPPDTNKLFH QPVPNIAAPI HHPRLDNSFT  360
GNNLVTPIVN PQTEIGVENV NETSALQHTP RGVQKQIGPG VSPCVPMPGW EPGLPHGAAT  420
NNKQS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1227234RRSRRRKQ
2229234SRRRKQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:16957775, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017626860.10.0PREDICTED: basic leucine zipper 25-like isoform X2
SwissprotO227634e-73BZP10_ARATH; Basic leucine zipper 10
TrEMBLA0A0B0NSV80.0A0A0B0NSV8_GOSAR; Light-inducible CPRF2
STRINGGorai.004G218300.10.0(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM58482645
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G02640.22e-51bZIP family protein
Publications ? help Back to Top
  1. Pedrotti L, et al.
    Snf1-RELATED KINASE1-Controlled C/S1-bZIP Signaling Activates Alternative Mitochondrial Metabolic Pathways to Ensure Plant Survival in Extended Darkness.
    Plant Cell, 2018. 30(2): p. 495-509
    [PMID:29348240]