PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_19573_BGI-A2_v1.0 | ||||||||
Common Name | F383_02895 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 425aa MW: 45168 Da PI: 5.917 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 45.9 | 1.2e-14 | 213 | 267 | 3 | 57 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 + kr+rr+ +NRe+ArrsR+RK+a++ eLe+ v +L ae ++L k+l + +++ Cotton_A_19573_BGI-A2_v1.0 213 DAKRARRMRSNRESARRSRRRKQAQMNELETQVGQLRAEHSSLLKRLTDTNHKYD 267 68*****************************************988877776665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 4.7E-11 | 209 | 262 | No hit | No description |
SMART | SM00338 | 1.8E-17 | 211 | 275 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.024 | 213 | 259 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.1E-12 | 214 | 267 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.04E-10 | 215 | 264 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 218 | 233 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 4.1E-19 | 282 | 390 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0002240 | Biological Process | response to molecule of oomycetes origin | ||||
GO:0009626 | Biological Process | plant-type hypersensitive response | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:2000693 | Biological Process | positive regulation of seed maturation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0005737 | Cellular Component | cytoplasm | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence Send to blast |
MNSVFSVDDF SDPFWAASAT GAAAGMSRSQ SEWALEKFLE EFSGAGAAIQ GSRAGENVIG 60 TSLAVPQAPV SKSENGDGDG GAVEVKKPNN LNPPPSDSTP TVPIDADEYR AILKNKLHQA 120 CAAVALSRAS AVKAEGSSAQ AENQALQSGS DVQGSSKTQE QGEPDAGISA VSTTQKKPGT 180 QMRQATSGSS REDSDDGELE GDTETTENMD PADAKRARRM RSNRESARRS RRRKQAQMNE 240 LETQVGQLRA EHSSLLKRLT DTNHKYDEAA VDNRILKADI ETLRAKVKMA EETVKRVTGI 300 NPVLLSRPSV PTVPVPFVSS PLESSTGSVP LPPDTNKLFH QPVPNIAAPI HHPRLDNSFT 360 GNNLVTPIVN PQTEIGVENV NETSALQHTP RGVQKQIGPG VSPCVPMPGW EPGLPHGAAT 420 NNKQS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 227 | 234 | RRSRRRKQ |
2 | 229 | 234 | SRRRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to the C-box-like motif (5'-TGCTGACGTCA-3') and G-box-like motif (5'-CCACGTGGCC-3'), ABRE elements, of gene promoters. Binds to the 5'-ACGT-3' motif of seed storage protein (SSP) encoding gene promoters (e.g. At2S and CRU3) and promotes their expression in seeds when in complex with ABI3 and BZIP53. Involved in the defense responses to the biotrophic pathogen Hyaloperonospora parasitica and oxidative stress responses; mediates positively cell death (PubMed:12657652, PubMed:16957775, PubMed:19261733, PubMed:19531597). Promotes BZIP53-mediated response to hypoosmolarity stress that leads to POX1/PRODH1 accumulation (PubMed:16810321). {ECO:0000269|PubMed:12657652, ECO:0000269|PubMed:16810321, ECO:0000269|PubMed:16957775, ECO:0000269|PubMed:19261733, ECO:0000269|PubMed:19531597}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017626860.1 | 0.0 | PREDICTED: basic leucine zipper 25-like isoform X2 | ||||
Swissprot | O22763 | 4e-73 | BZP10_ARATH; Basic leucine zipper 10 | ||||
TrEMBL | A0A0B0NSV8 | 0.0 | A0A0B0NSV8_GOSAR; Light-inducible CPRF2 | ||||
STRING | Gorai.004G218300.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM5848 | 26 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G02640.2 | 2e-51 | bZIP family protein |
Publications ? help Back to Top | |||
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