PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_18441_BGI-A2_v1.0 | ||||||||
Common Name | F383_33491 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 327aa MW: 36748.4 Da PI: 7.0434 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.6 | 3.1e-14 | 256 | 298 | 5 | 47 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 +r++r++kNRe+A rsR+RK+a++ +Le +v++L++ N+ Lk Cotton_A_18441_BGI-A2_v1.0 256 RRQKRMIKNRESAARSRARKQAYTNQLELEVDQLKKMNSWLKR 298 69************************************98884 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.8E-10 | 252 | 311 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.117 | 254 | 299 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.63E-10 | 256 | 301 | No hit | No description |
Pfam | PF00170 | 2.9E-12 | 256 | 298 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 6.3E-13 | 256 | 300 | No hit | No description |
CDD | cd14707 | 3.54E-25 | 256 | 301 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 259 | 274 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 327 aa Download sequence Send to blast |
MGDRFMMSPN RSEGQHFPPL ASQISSLYNL TFDEVQSQLG KIGKPLNAMN LDELLRSLIA 60 VEEGGLVQNP SSSSSSSSSA ASFFLGNINL NGTLSKKTVD EVWKEIVNNG GGNVNAMDNR 120 FVQHQLTLGE TTLEDFLVRA GVINGGIQDG VIHPQQFMAI DPMPVVSQQA DWLQFQMAAV 180 QQQHHHHQQQ QMTMMDSNFN VPESVYENQV VDVGYHENQL AITMPMPAMS ATSSDSQPTA 240 ARKHRYSDVM EKTIERRQKR MIKNRESAAR SRARKQAYTN QLELEVDQLK KMNSWLKRQK 300 EVEMVLSANT NDTVPKYQLR RTSSASF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017645257.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 3 | ||||
TrEMBL | A0A0B0N0S3 | 0.0 | A0A0B0N0S3_GOSAR; Abscisic acid-insensitive 5-like protein 2 | ||||
STRING | Gorai.010G045600.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM17216 | 9 | 11 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 9e-54 | ABA-responsive element binding protein 3 |