PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Cotton_A_16536_BGI-A2_v1.0
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
Family bZIP
Protein Properties Length: 156aa    MW: 17940.8 Da    PI: 8.7085
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Cotton_A_16536_BGI-A2_v1.0genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.7e-112460541
                                CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                      bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeae 41
                                k+ +r+++NRe+ArrsR +K++ +e L ++v++L+ +
  Cotton_A_16536_BGI-A2_v1.0 24 KKRKRMISNRESARRSRMKKQKLLEDLVTEVASLKVQ 60
                                899*******************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.3E-132084IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.5192285IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.4E-72292No hitNo description
SuperFamilySSF579592.25E-102479No hitNo description
PfamPF001701.3E-82482IPR004827Basic-leucine zipper domain
CDDcd147024.36E-172574No hitNo description
PROSITE patternPS0003602742IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    Send to blast
MSNVPGMMSS GSEPDARGVN VDEKKRKRMI SNRESARRSR MKKQKLLEDL VTEVASLKVQ  60
IHNNTNKYEA LMQKIVVLES ENNALKVQQM ELAQYLKNLQ LMQTQMELLE FNLMNQPGRT  120
LCDIIVDINE PPKVQSWQCH GSNQPAIMAF TEMLNY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_017610243.11e-112PREDICTED: basic leucine zipper 1-like
TrEMBLA0A1U8I5H21e-108A0A1U8I5H2_GOSHI; basic leucine zipper 1-like
STRINGGorai.006G079800.11e-108(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM125812231
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49450.17e-23basic leucine-zipper 1