PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_16446_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 216aa MW: 23841.9 Da PI: 10.6704 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 47.2 | 4.7e-15 | 146 | 202 | 3 | 59 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 ++r +r++kNRe+A rsR+RK+a++ eLe +v+ L++eN +L+ + e++ + +++ Cotton_A_16446_BGI-A2_v1.0 146 NDRRRKRMMKNRESAARSRARKQAYTSELELEVAHLQEENAKLRRQQEKILATRDQV 202 589*****************************************8877766555555 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.9E-13 | 144 | 208 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.53 | 146 | 195 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 6.8E-13 | 147 | 201 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.81E-11 | 148 | 195 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 2.7E-14 | 148 | 195 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 151 | 166 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14707 | 4.17E-20 | 158 | 198 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 216 aa Download sequence Send to blast |
MEEVWKDISL ASLSDHPVDS ILSTRTKNPN FPSMILLDFL ATPINKEPPT PRTSGVSSND 60 TSSTEGPAPF VPGTILSLKF GFGSACRCTE SADPIRPNLE VNARAGVPAA LSFSFSHNSG 120 FRGFGSPKAF PSFCTKRAPK SSENSNDRRR KRMMKNRESA ARSRARKQAY TSELELEVAH 180 LQEENAKLRR QQEKILATRD QVPKKNTLSR TSTAPF |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017644481.1 | 1e-157 | PREDICTED: protein FD-like | ||||
TrEMBL | A0A0D2TSJ5 | 1e-141 | A0A0D2TSJ5_GOSRA; Uncharacterized protein | ||||
STRING | Gorai.009G192500.1 | 1e-142 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM1934 | 27 | 72 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35900.1 | 3e-39 | bZIP family protein |