PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_14671_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 166aa MW: 19000 Da PI: 7.2956 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.3 | 3.3e-13 | 31 | 88 | 5 | 62 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 ++ +r+++NReAArrsR RK++ ++ L v +L eN + +++ ++ + + ++e Cotton_A_14671_BGI-A2_v1.0 31 RKRKRMASNREAARRSRMRKQKHLDDLMGQVSQLAHENNQILANINITTQIYLNIEAE 88 5789***********************************9999998877777666665 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-15 | 27 | 91 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.9E-11 | 29 | 106 | No hit | No description |
PROSITE profile | PS50217 | 10.404 | 29 | 76 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 3.5E-10 | 31 | 76 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.19E-12 | 31 | 83 | No hit | No description |
CDD | cd14702 | 2.11E-17 | 32 | 82 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 34 | 49 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 166 aa Download sequence Send to blast |
MATSRTGSSS SSATRRSSSS VEEFQQVLNE RKRKRMASNR EAARRSRMRK QKHLDDLMGQ 60 VSQLAHENNQ ILANINITTQ IYLNIEAENT VLRAQMAELS TRLQSLNEIN DFISSNNGVF 120 GYDHPNNYEA DHDHHHHQVN IDTFMNNPWG CFYGNQPIFA SADMIM |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 30 | 51 | RKRKRMASNREAARRSRMRKQK |
2 | 43 | 50 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription factor that binds to specific DNA sequences in target gene promoters. BZIP2-BZIP63-KIN10 complex binds to the ETFQO promoter to up-regulate its transcription (PubMed:29348240). {ECO:0000250|UniProtKB:O65683, ECO:0000269|PubMed:29348240}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00267 | DAP | Transfer from AT2G18160 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017629679.1 | 1e-122 | PREDICTED: bZIP transcription factor 2-like | ||||
Swissprot | Q9SI15 | 2e-43 | BZIP2_ARATH; bZIP transcription factor 2 | ||||
TrEMBL | A0A1U8J1X5 | 1e-120 | A0A1U8J1X5_GOSHI; bZIP transcription factor 53-like | ||||
TrEMBL | A0A2P5Y3E8 | 1e-120 | A0A2P5Y3E8_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.007G200600.1 | 4e-97 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM501 | 28 | 154 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18160.1 | 1e-45 | basic leucine-zipper 2 |
Publications ? help Back to Top | |||
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