PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_11784_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | ERF | ||||||||
Protein Properties | Length: 171aa MW: 19210.8 Da PI: 8.7617 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 32.7 | 1.8e-10 | 8 | 42 | 25 | 55 |
AP2 25 ng....krkrfslgkfgtaeeAakaaiaarkkleg 55 +g +++r++lg+f taeeAa+a+++a+ + g Cotton_A_11784_BGI-A2_v1.0 8 RGvrqrQKRRVWLGTFETAEEAARAYDEAAILMSG 42 34433334*********************987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51032 | 14.117 | 1 | 50 | IPR001471 | AP2/ERF domain |
CDD | cd00018 | 8.69E-23 | 5 | 51 | No hit | No description |
SuperFamily | SSF54171 | 3.27E-13 | 6 | 51 | IPR016177 | DNA-binding domain |
SMART | SM00380 | 2.9E-21 | 6 | 56 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 1.3E-7 | 8 | 40 | IPR001471 | AP2/ERF domain |
Gene3D | G3DSA:3.30.730.10 | 3.5E-18 | 13 | 50 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 171 aa Download sequence Send to blast |
MVKSKKFRGV RQRQKRRVWL GTFETAEEAA RAYDEAAILM SGRSAKTNFP VPKNQTGDEN 60 TTTCNSLSSI LSEKLRKCCK TPSPSLTCLR LDTENAHIGV WQKRAGSRSD SCWVMTVELG 120 KKNGEVTETN KMPASDEPIT NKMVRQEVSD NGLDEEEKAA LQMIEELLNR N |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 10 | 15 | RQRQKR |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Promotes cuticle formation by inducing the expression of enzymes involved in wax biosynthesis (PubMed:15070782, PubMed:15319479). Confers drought resistance (PubMed:15319479). Acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:15070782, ECO:0000269|PubMed:15319479}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017648661.1 | 1e-120 | PREDICTED: ethylene-responsive transcription factor WIN1 isoform X1 | ||||
Swissprot | Q9XI33 | 2e-64 | WIN1_ARATH; Ethylene-responsive transcription factor WIN1 | ||||
TrEMBL | A0A1U8IK04 | 1e-119 | A0A1U8IK04_GOSHI; ethylene-responsive transcription factor WIN1-like | ||||
TrEMBL | A0A2P5XME8 | 1e-119 | A0A2P5XME8_GOSBA; Uncharacterized protein | ||||
STRING | Gorai.011G082900.1 | 1e-114 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM834 | 28 | 116 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G15360.1 | 2e-54 | ERF family protein |