PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_10770_BGI-A2_v1.0 | ||||||||
Common Name | F383_31614 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 426aa MW: 46333.8 Da PI: 9.8477 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.8 | 2.8e-14 | 347 | 399 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L+k+ ee+ ++ + Cotton_A_10770_BGI-A2_v1.0 347 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINEELQKKQEEMMEMQK 399 79*****************************************9999998865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-12 | 343 | 409 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.818 | 345 | 396 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.85E-10 | 347 | 396 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.0E-13 | 347 | 396 | No hit | No description |
CDD | cd14707 | 1.33E-26 | 347 | 401 | No hit | No description |
Pfam | PF00170 | 1.8E-12 | 347 | 399 | IPR004827 | Basic-leucine zipper domain |
PROSITE pattern | PS00036 | 0 | 350 | 365 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MGSHLNFKDF GDAPSMEGNE SKPLGNFPLT RQSSIYSLTF DELQNTFGGI GKDFGSMNMD 60 ELLKNISTAE ETQAFMTASV PGGEGSLSGG NLQRQGSLTL PRTLSQKTVD EVWRNLMKEN 120 DGAKDGSSGG GGGGANLPQR QRTLGEMTLE EFLVKAGVVR EDMQQFGVPN NTGFFGNNNS 180 GVALGFQQTN RNNGFLSNNN SVLSQPPRLP QNMTGTKSSQ PQPQQQQQQQ PPQQQQQQPQ 240 ARPVFPEQQT VAFAPSMHLM NNTQLASPGG RSSMVGIGDP SMNSNIVQSS GLQSGGMGIV 300 GIGSPASQIS SDVISKNSVD TSSLSPVPYV FGRGRKCSAA LEKVVERRQR RMIKNRESAA 360 RSRARKQAYT LELEAEVAKL KEINEELQKK QEEMMEMQKN QTLEAVNRAW GGGKRQCLRR 420 TLTGPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HQ527484 | 1e-132 | HQ527484.1 Gossypium herbaceum clone NBRI_E_EYT27PB03G3LVN simple sequence repeat marker, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017637952.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Swissprot | Q9M7Q3 | 1e-125 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A0B0N178 | 0.0 | A0A0B0N178_GOSAR; Abscisic acid-insensitive 5-like protein 4 | ||||
STRING | Gorai.008G024700.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM734 | 27 | 129 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G49720.1 | 1e-89 | abscisic acid responsive element-binding factor 1 |