PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Cotton_A_00792_BGI-A2_v1.0 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
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Family | bZIP | ||||||||
Protein Properties | Length: 388aa MW: 41903.3 Da PI: 10.032 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44 | 4.8e-14 | 310 | 362 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L k+ ee+ ++ + Cotton_A_00792_BGI-A2_v1.0 310 RRQRRMIKNRESAARSRARKQAYTLELEAEVAKLKEMNQELLKKQEEMMEMQK 362 79****************************************99999988865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 3.0E-11 | 306 | 370 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.68 | 308 | 359 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 4.4E-13 | 310 | 360 | No hit | No description |
Pfam | PF00170 | 3.7E-12 | 310 | 362 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 4.92E-10 | 310 | 360 | No hit | No description |
CDD | cd14707 | 6.10E-25 | 310 | 364 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 313 | 328 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 388 aa Download sequence Send to blast |
MGSHLNFKNF GGDGNNGSKP VANSPLVRQS SIYSLTFDEL QSTFGGLGKD FGSMNMDELL 60 RNISTAEETQ SAMTASVSVG EGGGVSGGNL QKQGSLTLPR TLSQKTVDEV WKYLMKESDG 120 GSNNGSTGGE VNLPQRQQTL GTMTLEEFLA RAGVVREDMQ QIGMVNNGGF FADNSALALG 180 FQQANTNNGF ASGVKSSSQL QQQPQPLFPK QQVVAFAPPM HLMNGTQLAS PGAKGSVVGI 240 GDPSMNNNLV QTTGLQGGGI GIVGLGSPAS QISSDVVSKN STDTTSPSPV PYIFGRGRKC 300 SANLEKVVER RQRRMIKNRE SAARSRARKQ AYTLELEAEV AKLKEMNQEL LKKQEEMMEM 360 QKNQMLEKAN RPWGRKRQCL RRTITCPW |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the ABA-responsive element (ABRE). Mediates stress-responsive ABA signaling. {ECO:0000269|PubMed:11884679, ECO:0000269|PubMed:15361142}. |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Up-regulated by drought, salt, abscisic acid (ABA). {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:16284313}. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_017634043.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Refseq | XP_017634044.1 | 0.0 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 | ||||
Swissprot | Q9M7Q3 | 1e-119 | AI5L6_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 6 | ||||
TrEMBL | A0A0B0P8Y5 | 0.0 | A0A0B0P8Y5_GOSAR; Abscisic acid-insensitive 5-like protein 6 | ||||
STRING | Gorai.005G237400.1 | 0.0 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM734 | 27 | 129 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G34000.2 | 4e-78 | abscisic acid responsive elements-binding factor 3 |