PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Cotton_A_00304_BGI-A2_v1.0 | ||||||||
Common Name | F383_01995 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae; Gossypium
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 170aa MW: 19097.8 Da PI: 10.2765 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 30 | 1.1e-09 | 84 | 119 | 5 | 40 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 k+ +r++ NR +A++sR+R+ +++++Le+k++ Lea Cotton_A_00304_BGI-A2_v1.0 84 KKLKRLIANRASAQKSRLRRVEYVDKLEKKAEFLEA 119 899*****************************9998 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 6.3E-9 | 80 | 144 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 8.864 | 82 | 145 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.3E-9 | 84 | 149 | No hit | No description |
Pfam | PF00170 | 4.4E-8 | 84 | 120 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.44E-8 | 84 | 133 | No hit | No description |
CDD | cd14703 | 5.99E-11 | 85 | 136 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 87 | 102 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 170 aa Download sequence Send to blast |
MDPKNETSPN AADNQMLNPN AENEDLTLPL ESIQPRRVSL HKRSASDSLA FVKEPYWHAP 60 SSSAQGRLLG GAAGSSSASH MDPKKLKRLI ANRASAQKSR LRRVEYVDKL EKKAEFLEAT 120 ASLVSPRVTS ERKKRMMLLK ENAELKQKIE FYDKLLEKQD GEAAMLNIKH |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_017622672.1 | 1e-121 | PREDICTED: basic leucine zipper 2-like isoform X2 | ||||
TrEMBL | A0A0B0MP23 | 1e-120 | A0A0B0MP23_GOSAR; Transcription factor RF2b | ||||
STRING | Gorai.002G265300.1 | 1e-100 | (Gossypium raimondii) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM18651 | 6 | 8 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G42380.2 | 4e-16 | bZIP family protein |