PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna29444.1-v1.0-hybrid
Organism
Fragaria vesca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family B3
Protein Properties Length: 2125aa    MW: 241765 Da    PI: 8.9017
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna29444.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B345.21.7e-1418941799
                             E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                       B3 17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                              +pkkf++++g+    s  + l+ +sg +Wev +  +++++++++++GW  F+k   L+ g f++F+++g+s+f   v +f++
  mrna29444.1-v1.0-hybrid 18 KIPKKFVKKYGEH--LSDSVCLKIPSGCEWEVGV--TRNGNKVWFEQGWPAFAKFYSLDYGVFLLFRYEGNSKF--QVCIFDT 94
                             69********955..8889***************..**********************************9999..9999987 PP
2B344.52.7e-14220300487
                              E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
                       B3   4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkl.iyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                              v++++++ +++ + l  +f++++  + ++   ++l+    rsW vkl iy k+s+   l++GW  F+++n L +gD+++F+l++ 
  mrna29444.1-v1.0-hybrid 220 VTMHPSYVQRNTMNLRGSFVKNFATQ-HQ--LVKLQ-VGDRSWPVKLnIYHKGSSIAKLSGGWPAFCQENSLSDGDVCIFELIQV 300
                              55566666666799999999666544.34..45543.466*******556888888*************************9975 PP
3B348.31.8e-15341431199
                              EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                       B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                              ffkv      ++s  l +p kf+ ++g     sk ++l+ +sg +W+v++  +k+++++++ kGW eF k   L+ g fv+F+++g
  mrna29444.1-v1.0-hybrid 341 FFKVI--VEESSSIKLKIPPKFVMKYGDY--LSKSVRLKLPSGCQWQVEV--TKSDSEVWFDKGWPEFFKFYTLNYGHFVIFTYHG 420
                              67777..445556669**********866..8899***************..********************************** PP

                              SSEE..EEEEE-S CS
                       B3  87 rsefelvvkvfrk 99 
                              +s f   v +f++
  mrna29444.1-v1.0-hybrid 421 NSMF--EVCIFDR 431
                              9999..9999987 PP
4B332.12e-10523604185
                              EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                       B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                              f+ +++++++  +  +++p +f+ ++ +   +++ ++l     rsW  +l+++   g+  +++GW eFv +n+L+ gD+++F+l+
  mrna29444.1-v1.0-hybrid 523 FIMIFMQPSYIHRYSVSIPFRFVMNFAKF--RQQVVKLLV-GDRSWPARLNVSSLHGKAKISSGWHEFVIENHLRLGDVCIFELM 604
                              566788888888888********666533..333444444.66*******777777779************************86 PP
5B340.93.8e-136607351899
                              --HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                       B3  18 lpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                              +pkkf+ +hg++   s  + l+ +sg  Wev+l  +++ ++ +++kGW eF +   ++ g f+vF+++g+s+f   v +f++
  mrna29444.1-v1.0-hybrid 660 IPKKFMIKHGKN--LSSLVCLKLPSGSDWEVEL--TRCNSKAWFEKGWPEFSRFCSVDYGYFLVFRYQGNSTF--EVCIFDR 735
                              9********966..8889***************..99999999**************************9999..9999997 PP
6B356.35.7e-18867960190
                              EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.....-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT- CS
                       B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.....rsWevkliy.rkksgryvltkGWkeFvkangLkegD 78 
                              ffk+ +  ++  +++l+lp +fa++h  +++       tl+ +sg     ++W+vk++y  kks++++l  GW++Fv++n+Lk+gD
  mrna29444.1-v1.0-hybrid 867 FFKISMELSNIHKSILYLPSEFAQRHliKLPAGI---ATLQVSSGrtlsaKTWSVKFKYdHKKSKAHFLN-GWSDFVRDNHLKVGD 948
                              99************************87555433...5555555666888*********66666668888.*************** PP

                              EEEEEE-SSSEE CS
                       B3  79 fvvFkldgrsef 90 
                              ++ F l++r ef
  mrna29444.1-v1.0-hybrid 949 MCGFILIDRYEF 960
                              *****9998776 PP
7B343.94.2e-1410521128485
                               E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                       B3    4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85  
                               +l + +  ks+ ++lp +f++++ ++   ++t++l   + rsW vkl ++ ++ +  +++GW  F+k+++L+ gD+++F+l+
  mrna29444.1-v1.0-hybrid 1052 TLGTLHKEKSN-VYLPASFVKSFIKE--AKQTVRLLV-KDRSWPVKL-FCYGKTSAKFSGGWAAFAKEHQLEKGDICIFELT 1128
                               55566667776.********999534..334777766.67*******.6666667789**********************86 PP
8B3444e-141131121114100
                               T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
                       B3   14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97  
                               + + +pk+f+ ++g++   s  + l+ +sg +Wev+l  r++ g+ ++++GW eF +   L+ g f+vF+++g+s+f   v +f
  mrna29444.1-v1.0-hybrid 1131 NDVKIPKHFLIKYGQD--LSNSVHLKLPSGSEWEVEL--RRCNGKAWFERGWPEFSRFCSLDYGAFLVFRYQGNSQF--DVCIF 1208
                               5689*********977..7889***************..**********************************9999..99999 PP

                               -SS CS
                       B3   98 rks 100 
                               +ks
  mrna29444.1-v1.0-hybrid 1209 DKS 1211
                               985 PP
9B353.25.3e-1713231411294
                               EEE-..-HHHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                       B3    2 fkvltpsdvlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84  
                               + ++ ps+ +  g + lp++f ++h +++  +    +l+ ++gr+W+vk++y+ k ++  ++ GW+ Fv++n+Lk+gD++vF l
  mrna29444.1-v1.0-hybrid 1323 KMAMQPSHIHFGGKIELPRNFSKRHlKLPA-G--IAILRISDGRTWSVKFKYDHKNSKARFSCGWSLFVRDNNLKVGDVCVFVL 1403
                               55678889999999***********65553.3..4788899***********99999999***********************9 PP

                               -SSSEE..EE CS
                       B3   85 dgrsefelvv 94  
                               ++  + el++
  mrna29444.1-v1.0-hybrid 1404 ID--CNELLF 1411
                               86..455555 PP
10B337.73.6e-12149915751090
                               HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
                       B3   10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsef 90  
                               ++ ++++ +  +f++++ + k+++++l++ed   rsW v+l    +++    l++GW +F+k++ LkegD+++F+l++ ++ 
  mrna29444.1-v1.0-hybrid 1499 SGHRKNVNVQASFFKSFFNRKKQTVKLQVED---RSWPVNL--VPNGNFaGRLSGGWARFAKEHCLKEGDVCIFELTEMNGS 1575
                               5566667888899999977777777777666...*******..5555555689**********************9864444 PP
11B352.21.1e-1616181703899
                               -HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS
                       B3    8 sdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89  
                                d++++  l +pkkf++e+  g++      + l+ +sg +Wev++  +++ g+++++k+W eF k   L  gDf+vF+++g+se
  mrna29444.1-v1.0-hybrid 1618 DDTSRHVKLGIPKKFVNEYcrGLS----DSVCLKLPSGSEWEVEV--TRSNGKVWFEKCWPEFSKFYSLGIGDFLVFEYEGNSE 1695
                               577788889**********86544....47***************..**********************************999 PP

                               E..EEEEE-S CS
                       B3   90 felvvkvfrk 99  
                               f  +v +f++
  mrna29444.1-v1.0-hybrid 1696 F--NVFIFDR 1703
                               9..8888876 PP
12B3581.8e-1818461934294
                               EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                       B3    2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85  
                               fkv +++ + ++g l +p +f ++h  +  ++ t+tl+ ++grsW+v+l+y   + ++ ++++W  Fv+ n+Lk+gD++vF+l+
  mrna29444.1-v1.0-hybrid 1846 FKVVMQPTYIQKGYLAVPSEFSKRHLTN--QPATVTLQVLDGRSWSVQLKYYHERAEVRFQNCWPLFVRGNNLKVGDVCVFTLI 1927
                               79999********************645..7789****************9999999*************************99 PP

                               SSSEE..EE CS
                       B3   86 grsefelvv 94  
                               + sef  ++
  mrna29444.1-v1.0-hybrid 1928 NCSEF--LF 1934
                               75666..44 PP
13B332.12e-10203921211096
                               HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE.. CS
                       B3   10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefel 92  
                               ++ks+ + lp +fa ++ + ++e++     + + r W v l++ k s    +++GW  Fv++  L++gD+++F+l++  ++  l
  mrna29444.1-v1.0-hybrid 2039 MGKSA-VHLPASFAWSFIKREKEKVW---LQVTDRLWPVDLTVFKPS-LASFSSGWDTFVEEYSLRVGDVCIFELMEMdDDIIL 2117
                               44444.99******999544444333...44466*******664443.35699*********************9975466555 PP

                               EEEE CS
                       B3   93 vvkv 96  
                                v++
  mrna29444.1-v1.0-hybrid 2118 QVHF 2121
                               5555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM010193.4E-61695IPR003340B3 DNA binding domain
SuperFamilySSF1019361.49E-171895IPR015300DNA-binding pseudobarrel domain
PfamPF023622.3E-111894IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.9E-181895IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.0121995IPR003340B3 DNA binding domain
CDDcd100177.04E-92893No hitNo description
Gene3DG3DSA:2.40.330.105.0E-16211302IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019365.1E-13213300IPR015300DNA-binding pseudobarrel domain
SMARTSM010193.3E-7217313IPR003340B3 DNA binding domain
CDDcd100172.06E-9217301No hitNo description
PROSITE profilePS5086310.179217313IPR003340B3 DNA binding domain
PfamPF023622.8E-12218302IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.6E-20338432IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.407339432IPR003340B3 DNA binding domain
SuperFamilySSF1019364.51E-20339431IPR015300DNA-binding pseudobarrel domain
CDDcd100172.66E-15340430No hitNo description
PfamPF023622.4E-12341431IPR003340B3 DNA binding domain
SMARTSM010193.6E-10341432IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-15516605IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.04E-16517604IPR015300DNA-binding pseudobarrel domain
CDDcd100171.09E-12523609No hitNo description
PfamPF023621.4E-8523604IPR003340B3 DNA binding domain
PROSITE profilePS5086311.237523622IPR003340B3 DNA binding domain
SMARTSM010193.9E-4524617IPR003340B3 DNA binding domain
SMARTSM010196.7E-9652736IPR003340B3 DNA binding domain
SuperFamilySSF1019362.75E-17658737IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.105.3E-18658737IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.589660736IPR003340B3 DNA binding domain
CDDcd100172.63E-11660734No hitNo description
PfamPF023622.9E-10660735IPR003340B3 DNA binding domain
SuperFamilySSF1019361.24E-18863968IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.5E-16864963IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086313.521867968IPR003340B3 DNA binding domain
CDDcd100172.81E-18867964No hitNo description
PfamPF023622.2E-15867960IPR003340B3 DNA binding domain
SMARTSM010197.6E-11867968IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.4E-1610431130IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.26E-1610441128IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.30610481129IPR003340B3 DNA binding domain
CDDcd100178.08E-1210481131No hitNo description
SMARTSM010198.2E-510491132IPR003340B3 DNA binding domain
PfamPF023622.6E-1210501129IPR003340B3 DNA binding domain
PfamPF023622.3E-1111311210IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.103.4E-1811311211IPR015300DNA-binding pseudobarrel domain
SMARTSM010198.6E-411331211IPR003340B3 DNA binding domain
SuperFamilySSF1019362.16E-1711331211IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086312.19611351211IPR003340B3 DNA binding domain
CDDcd100179.05E-1211351209No hitNo description
Gene3DG3DSA:2.40.330.101.3E-2113141411IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.75E-2313171417IPR015300DNA-binding pseudobarrel domain
CDDcd100179.06E-2313201417No hitNo description
PROSITE profilePS5086314.57913221419IPR003340B3 DNA binding domain
SMARTSM010194.8E-1513221419IPR003340B3 DNA binding domain
PfamPF023622.4E-1513251411IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.101.2E-1814861581IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019368.44E-1514881581IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.8714901585IPR003340B3 DNA binding domain
CDDcd100177.78E-1214911580No hitNo description
SMARTSM010192.3E-914931583IPR003340B3 DNA binding domain
PfamPF023622.1E-915001575IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.108.6E-2116071704IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.92E-2016081704IPR015300DNA-binding pseudobarrel domain
CDDcd100171.31E-1616101702No hitNo description
PROSITE profilePS5086313.09816111704IPR003340B3 DNA binding domain
SMARTSM010191.9E-1216121704IPR003340B3 DNA binding domain
PfamPF023622.8E-1416181703IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.105.3E-2218391935IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019367.32E-2218411939IPR015300DNA-binding pseudobarrel domain
CDDcd100171.32E-1818441936No hitNo description
PfamPF023628.7E-1718451933IPR003340B3 DNA binding domain
SMARTSM010193.5E-1418451942IPR003340B3 DNA binding domain
PROSITE profilePS5086313.98718451940IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.104.0E-1520242123IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019362.35E-1520252123IPR015300DNA-binding pseudobarrel domain
CDDcd100171.89E-1120292123No hitNo description
SMARTSM010198.3E-520292123IPR003340B3 DNA binding domain
PROSITE profilePS5086311.46220292124IPR003340B3 DNA binding domain
PfamPF023621.8E-720382123IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 2125 aa     Download sequence    Send to blast
MPPEIYELQI WGLFRFKKIP KKFVKKYGEH LSDSVCLKIP SGCEWEVGVT RNGNKVWFEQ  60
GWPAFAKFYS LDYGVFLLFR YEGNSKFQVC IFDTSATEIA YPIRIEEPDN INCEDIDDDN  120
SVEVLDDFSH PYCPKTRAKS PLPSPRPHKR RKISSNSEGK IQGKTDIIGK EHGGGSSSTQ  180
NVRKETPKVC GMKHSSTAKT KTTALERAAG FTSEKPFSIV TMHPSYVQRN TMNLRGSFVK  240
NFATQHQLVK LQVGDRSWPV KLNIYHKGSS IAKLSGGWPA FCQENSLSDG DVCIFELIQV  300
NDVKIPPKFV MKYGDYLSKS VRLKLPEMSA FRQAFSATTR FFKVIVEESS SIKLKIPPKF  360
VMKYGDYLSK SVRLKLPSGC QWQVEVTKSD SEVWFDKGWP EFFKFYTLNY GHFVIFTYHG  420
NSMFEVCIFD RTATEIEYPI IMDKCYVESE PSIKKLEDFI PCPKIRDNSP SPSARLPRRR  480
RTASPTTEAN IKGKEDDFSR KNDGGDPATA LQRVKAFKSE NAFIMIFMQP SYIHRYSVSI  540
PFRFVMNFAK FRQQVVKLLV GDRSWPARLN VSSLHGKAKI SSGWHEFVIE NHLRLGDVCI  600
FELMEIASVD SLPHRLEVEN LKYCNFVIQF LQFVDERCRP QKTSENVLLF NLTHPVVQEI  660
PKKFMIKHGK NLSSLVCLKL PSGSDWEVEL TRCNSKAWFE KGWPEFSRFC SVDYGYFLVF  720
RYQGNSTFEV CIFDRSCTEI DYPITVSTID EDEADDLSIE ILDSSPCLKT REKPSIVCPP  780
CKKMRTSLST NSDRISEDES APPYPMVYIE KTTPTKDSHC SSSKMKVENT AGASRCTRRF  840
LKPTLDLEVT ENAPKRATAF KPDGKPFFKI SMELSNIHKS ILYLPSEFAQ RHLIKLPAGI  900
ATLQVSSGRT LSAKTWSVKF KYDHKKSKAH FLNGWSDFVR DNHLKVGDMC GFILIDRYEF  960
LFEVALPNVE APCFLMSAGE GRGEHIQVQE KRNPLIKVEN ESDMISEFDL SSSFAIVKKP  1020
NIGGQVTQRR ASRSNLDAAN KFVSENPFFV VTLGTLHKEK SNVYLPASFV KSFIKEAKQT  1080
VRLLVKDRSW PVKLFCYGKT SAKFSGGWAA FAKEHQLEKG DICIFELTEM NDVKIPKHFL  1140
IKYGQDLSNS VHLKLPSGSE WEVELRRCNG KAWFERGWPE FSRFCSLDYG AFLVFRYQGN  1200
SQFDVCIFDK SATEIEYPLT IPKIEEVDED ALPIEVLEDS PPCPKRRENS SLLCPPCKKM  1260
RTSFSGETDF ATKTDGVCSS RPKRVLKQTR HKNLGRMTPL TTTEKAIALQ RANAFKSDKP  1320
SFKMAMQPSH IHFGGKIELP RNFSKRHLKL PAGIAILRIS DGRTWSVKFK YDHKNSKARF  1380
SCGWSLFVRD NNLKVGDVCV FVLIDCNELL FEVILFPTIE ATNHPFPPGY GKGGTDQVEE  1440
GSPIVEAESK IKCEIGVMPK IYEQVTQKHS KFLRASRISL EAANKFMSEN PYFSVPLRSG  1500
HRKNVNVQAS FFKSFFNRKK QTVKLQVEDR SWPVNLVPNG NFAGRLSGGW ARFAKEHCLK  1560
EGDVCIFELT EMNGSALKVH KSGDKEKLKS MSSFRRETDR CRPVCCSTTP RFIQVILDDT  1620
SRHVKLGIPK KFVNEYCRGL SDSVCLKLPS GSEWEVEVTR SNGKVWFEKC WPEFSKFYSL  1680
GIGDFLVFEY EGNSEFNVFI FDRSTTEIEY PIKRPKMEEA LDNELSVEIL EDIPPSPKTR  1740
EKTPQPCPQA YKKMKTSSRG KADDVFENVN TEPLEEPKKN NDFHCSASKI KSVGDFPGKK  1800
DRGGSSSTER FLKQTPGFCG EKHLSNTNEK ASIQRNLASE TEKPYFKVVM QPTYIQKGYL  1860
AVPSEFSKRH LTNQPATVTL QVLDGRSWSV QLKYYHERAE VRFQNCWPLF VRGNNLKVGD  1920
VCVFTLINCS EFLFEVVFYP VTEAANCPLS PGHGKGTIHQ VKRKGSPVIE VESDCDVICG  1980
IGVSGSLKTG KNKVSKTGVQ VTGRPSSPLT TPGYNHHEAA NNFVSENPFF KVTLGFCHMG  2040
KSAVHLPASF AWSFIKREKE KVWLQVTDRL WPVDLTVFKP SLASFSSGWD TFVEEYSLRV  2100
GDVCIFELME MDDDIILQVH FFRC*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4i1k_A4e-13510141622140B3 domain-containing transcription factor VRN1
4i1k_B4e-13510141622140B3 domain-containing transcription factor VRN1
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna29444.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011465437.10.0PREDICTED: B3 domain-containing transcription factor VRN1-like
TrEMBLA0A2P6RMZ40.0A0A2P6RMZ4_ROSCH; Putative transcription factor B3-Domain family
STRINGXP_004301863.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3392222
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-37B3 family protein