PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna20650.1-v1.0-hybrid
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family EIL
Protein Properties Length: 742aa    MW: 81847.4 Da    PI: 6.5613
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna20650.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3435.35.7e-133373741320
                              XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                     EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpveg 86 
                              eel++rmwkd+++lkr+ke++k   e++  a++++k ++s++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+g
  mrna20650.1-v1.0-hybrid  37 EELERRMWKDRIKLKRIKEKQKL--EAQM-AAEKQKPKQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSG 119
                              8**************99999886..4455.599***************************************************** PP

                              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH CS
                     EIN3  87 asdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPW 172
                              asd++raWWkekv+fd+ngpaai ky+a+ l++++++ +  ++ ++++ l++lqD+tlgSLLs+lmqhcdppqr++plekg++pPW
  mrna20650.1-v1.0-hybrid 120 ASDNIRAWWKEKVKFDKNGPAAIGKYEAEILAMTDADTN--RNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGIPPPW 203
                              *****************************9999988887..67999999************************************* PP

                              ---S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S- CS
                     EIN3 173 WPtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekeca 258
                              WPtG+e+ww +lg+++ q+ ppykkphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee++++
  mrna20650.1-v1.0-hybrid 204 WPTGNEDWWVKLGIPHGQS-PPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIR 288
                              ******************9.9***************************************************************** PP

                              -XXXXXX........XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX........................XXXXXXXXXX CS
                     EIN3 259 tvsahss........slrkqspkvtlsceqkedvegkkeskikhvqavktta........................gfpvvrkrkk 312
                              + s+++            +++++ t+s ++++dv+g++++ i + +  ++ +                        g     k k 
  mrna20650.1-v1.0-hybrid 289 QPSSDNGtsgitemlCRGRGEKHATASGNSDYDVDGTDKELIDAGSVSSKDDrrtelidvepssnlrngtttnrvqG-----KEK- 368
                              *****444567776433349999************888888664333333335568888888888888655332221.....222. PP

                              XXXXXXXX CS
                     EIN3 313 kpsesakv 320
                                +e+++ 
  mrna20650.1-v1.0-hybrid 369 --GEKRTK 374
                              ..222222 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.5E-12637284No hitNo description
Gene3DG3DSA:1.10.3180.104.5E-72159292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.44E-62165288IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 742 aa     Download sequence    Send to blast
MGDLGEVGPE ISSDIEEDLR CDNIAEKDVS DEEIDPEELE RRMWKDRIKL KRIKEKQKLE  60
AQMAAEKQKP KQSSDQARRK KMSRAQDGIL KYMLKLMEVC KARGFVYGII PEKGKPVSGA  120
SDNIRAWWKE KVKFDKNGPA AIGKYEAEIL AMTDADTNRN GNSQSILQDL QDATLGSLLS  180
SLMQHCDPPQ RKYPLEKGIP PPWWPTGNED WWVKLGIPHG QSPPYKKPHD LKKMWKVGVL  240
TAVIKHMSPD IAKIRRHVRQ SKCLQDKMTA KESAIWLGVL SREEALIRQP SSDNGTSGIT  300
EMLCRGRGEK HATASGNSDY DVDGTDKELI DAGSVSSKDD RRTELIDVEP SSNLRNGTTT  360
NRVQGKEKGE KRTKRKRSPV RPSSDDQLPA PIVSEHMHVE PINALLDINH TDAQMIGFPI  420
HEDHQENVSV TTLRPQVHDL GVQALPASGF NYYADVPDDG ALATTQSMHV GGTPMLYYGV  480
QSAEMHHGNM FDLYNPSAEY VPGHERQQSQ IVMNEPQIGP ADGVPIQTVR NGNEITGGDL  540
PFYKDPFLSE QDRMVDPNFD LGVIFNSPFR PDLGFEGTAS FDDELDAFRT RMSCSTPGAL  600
SSPKLTSSSK DNPALVNFPF SGTCMGVSLV FPSSLAPISG AGTDNINKIR MGHSKLALNW  660
VLILVLVLMA ASVSSVESSR KCLQVGTSKT SENKGTQGIQ IKEADRAYGN GAKVFSTVDN  720
SDRLVPTGPD PLHHNNNPIK P*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-751642959140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00233DAPTransfer from AT1G73730Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna20650.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004295232.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A482EUX80.0A0A482EUX8_9ROSA; Ethylene-insensitive 3-like 1 protein
STRINGXP_004295232.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. WawrzyƄska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]