PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna07844.1-v1.0-hybrid
Organism
Fragaria vesca
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 325aa    MW: 36127.9 Da    PI: 6.8168
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna07844.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.61.3e-13156211560
                              CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                   bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                              k+ +r ++NR++A++sR++K+++i+e e+k+k+Lea+   L  ++e  k++++ l+
  mrna07844.1-v1.0-hybrid 156 KKLKRIYSNRVSAQKSRLKKLQYIAEMEKKAKALEAQVAVLSPQVEFFKNQSYFLQ 211
                              899**********************************9999999998888877665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-10150206No hitNo description
SMARTSM003381.4E-8152216IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.105154217IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-10156210No hitNo description
PfamPF001706.8E-11156212IPR004827Basic-leucine zipper domain
CDDcd147031.19E-14157206No hitNo description
PROSITE patternPS000360159174IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 325 aa     Download sequence    Send to blast
MESDKNFGEI SQLERVATLA SSPFSMMDPS TLPLSPNLSQ VWKQPYLMNH FENGESIIGA  60
ETHFQPFDTH HTATATLIPT PTTTTTTTTT PPEVEAIQDK GKKFQEESDS DANHGNGSKT  120
VTVKTEKEET VYDTLIGGPL QIRVGRNIAP ESLDPKKLKR IYSNRVSAQK SRLKKLQYIA  180
EMEKKAKALE AQVAVLSPQV EFFKNQSYFL QMERVALNES IAARAAERLN KAAQIEANKK  240
EVQRLRLLHL QKIEQQQMQL QASMYMNMDG VESMDQKLVN NPAGQSFEKA PQENLQNQIN  300
DAEKPDVKPS LGVAAVGGNK ELKS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna07844.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011460972.10.0PREDICTED: basic leucine zipper 61-like
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF148181113
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42380.27e-16bZIP family protein