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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
mrna05720.1-v1.0-hybrid |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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| Family |
GRAS |
| Protein Properties |
Length: 437aa MW: 48748.7 Da PI: 5.6069 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| mrna05720.1-v1.0-hybrid | genome | GDR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 310.3 | 4.3e-95 | 31 | 433 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvs.elykalppsetseknsseelaalkl..f 84
++lL++cA+a++++d++laq++L+ l+++a pdgd++qRl+ f++AL ar ars+s +l +a+++ +++ +++++++ +l f
mrna05720.1-v1.0-hybrid 31 EQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSNQRLTCAFLRALIARAARSGSlKLLAAMNAAQANLAIHTHKFSVIELagF 116
79****************************************************5442677777888877666888888888899* PP
GRAS 85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp...egppslRiTgvgspesg...skeeleetger 164
+++P+++f++ +aN aIleaveg + +Hi+D+++++++Q p+L +a+asR+ pp l++T+ g e + ++ee+g++
mrna05720.1-v1.0-hybrid 117 IDLTPWHRFGFTAANAAILEAVEGFSVIHIVDLSLTHCMQIPTLVDAIASRQdglTTPPLLKLTVAGTTEDVppmLDLSYEELGSK 202
****************************************************65556***********887798888999****** PP
GRAS 165 LakfAeelgvpfefnvl.......vakrledleleeLrvkp.......gEalaVnlvlqlhrll...............desvsle 221
L +fA++ ++ +ef+v+ a+ +e+Lrv++ +Eal++n++++lh+++ + ++s++
mrna05720.1-v1.0-hybrid 203 LVNFARSRNIILEFRVIpssytdgFANL-----IEQLRVQNlvypesgHEALVINCHMMLHYIPeetfqnfepcsssstSITTSST 283
*****************88844444444.....555555555555699***************************99875555555 PP
GRAS 222 serdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerre 307
s r+ +Lk+v++l P+vvv+v+++ad++s++++ r+ +a++y + +d++++ lpr s++r+++E+ + ++i+nv+a eg++r+e
mrna05720.1-v1.0-hybrid 284 SLRSMFLKAVRGLDPTVVVLVDEDADLTSNDLVGRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEAD-VCWKIENVIAYEGFQRVE 368
5788***************************************************************.99**************** PP
GRAS 308 rhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
r e + +W +r+++aGF++vp++e+a++++k++l +++ g+ ++ e++ lvl+Wk++++v+++aW
mrna05720.1-v1.0-hybrid 369 RLEPKCRWVQRMRSAGFRSVPFGEEAVNEVKAMLDEHA-AGWGMKREEEDLVLTWKGHNVVFATAW 433
**************************************.88899999999**************** PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 437 aa
Download sequence Send
to blast |
MNKNQTNRTR PWPGFPTSSK LTNFGDANCM EQLLVHCANA IETNDATLAQ QILWVLNNIA 60
PPDGDSNQRL TCAFLRALIA RAARSGSLKL LAAMNAAQAN LAIHTHKFSV IELAGFIDLT 120
PWHRFGFTAA NAAILEAVEG FSVIHIVDLS LTHCMQIPTL VDAIASRQDG LTTPPLLKLT 180
VAGTTEDVPP MLDLSYEELG SKLVNFARSR NIILEFRVIP SSYTDGFANL IEQLRVQNLV 240
YPESGHEALV INCHMMLHYI PEETFQNFEP CSSSSTSITT SSTSLRSMFL KAVRGLDPTV 300
VVLVDEDADL TSNDLVGRLR SAFNYLWIPY DTVDTFLPRG SKQRQWYEAD VCWKIENVIA 360
YEGFQRVERL EPKCRWVQRM RSAGFRSVPF GEEAVNEVKA MLDEHAAGWG MKREEEDLVL 420
TWKGHNVVFA TAWMPA*
|
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Probable transcription factor involved in plant development. {ECO:0000250}. |
