PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID mrna03751.1-v1.0-hybrid
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family ERF
Protein Properties Length: 347aa    MW: 38482.7 Da    PI: 4.6117
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
mrna03751.1-v1.0-hybridgenomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.76.1e-18113163155
                      AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                              s ++GVr++k +g+W+AeIrd +     +  r +lg++ tae+A ka++++++++e+
  mrna03751.1-v1.0-hybrid 113 SPFRGVRQRK-WGKWAAEIRDpF-----TkSRLWLGTYNTAEDASKAYEEMKLYFEK 163
                              679******9.**********66.....34**********************99886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103218.241114176IPR001471AP2/ERF domain
SMARTSM003805.1E-17114176IPR001471AP2/ERF domain
SuperFamilySSF541712.03E-15114161IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.8E-22115161IPR001471AP2/ERF domain
CDDcd000182.34E-21115156No hitNo description
PfamPF008474.5E-11115163IPR001471AP2/ERF domain
PRINTSPR003672.1E-9115126IPR001471AP2/ERF domain
PRINTSPR003672.1E-9137153IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    Send to blast
MPEPRNPRLN QGNSFKKSKR EQLYPSEEPK MVRKVRIICS DPDATDDSSS EDEGIDRKFH  60
KRMVKEVTLP FHFTRPSKLV VEPQSSCNNG VKTPTPKPKL GVLSKTSKRV TNSPFRGVRQ  120
RKWGKWAAEI RDPFTKSRLW LGTYNTAEDA SKAYEEMKLY FEKKLSLATA SDVSSEKSNN  180
TTTSCSAVVS RSVNTQQPAV SSEEESDCVY SQRSPASVLD VETCASNNIH SGGESENGGY  240
MENEDVGTNA LGQLPIPNDL GFMDEQPFGQ ELNFDGIDPI SFQAEIDSLL LDEIGQFFNV  300
FGSIDDVHIG GFEGNEPSNL PDCDFGDLGK EDFACWMTET SNIQCQ*
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00217DAPTransfer from AT1G68550Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapmrna03751.1-v1.0-hybrid
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004299085.10.0PREDICTED: ethylene-responsive transcription factor ERF118
RefseqXP_004299086.10.0PREDICTED: ethylene-responsive transcription factor ERF118
TrEMBLA0A3S8T9340.0A0A3S8T934_FRAAN; Transcription factor ERF47
STRINGXP_004299085.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF26903472
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.23e-37ERF family protein