PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00005883.1.g00001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | G2-like | ||||||||
Protein Properties | Length: 253aa MW: 27937.5 Da PI: 4.2009 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 38.9 | 2e-12 | 227 | 251 | 1 | 25 |
G2-like 1 kprlrWtpeLHerFveaveqLGGse 25 k+r+rWt+eLHe+Fveav+qLGGs+ FANhyb_rscf00005883.1.g00001.1 227 KARMRWTQELHEAFVEAVNQLGGSD 251 68*********************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 4.6E-10 | 225 | 251 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 253 aa Download sequence Send to blast |
MWNLGDSKAM SSAFPNLPTP LDVSYSRLPD SFQHSAQREN PMHSLLPQPS SLGNSYSSSS 60 SLPFDSQCSS VYPHERYPQN SPISMLPSGG KSLSHTHSEL QSTPVASYPE ENKDMSWCPD 120 SIEEFLHFPE NVPDQNGLVD TSTGAIISDD HAERTDWSDL YPLISFDGAL DPNWELSVDN 180 VVDPKPEVLN HSSDILVQQP KIQQHQPAQS GEIFTSPDPE STAPSTKARM RWTQELHEAF 240 VEAVNQLGGS DSE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011466012.1 | 1e-170 | PREDICTED: protein PHR1-LIKE 1 isoform X2 | ||||
TrEMBL | A0A2P6R5H5 | 1e-141 | A0A2P6R5H5_ROSCH; Putative transcription factor MYB-HB-like family | ||||
STRING | XP_004302103.1 | 1e-169 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1512 | 34 | 98 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G04450.2 | 2e-20 | G2-like family protein |