PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00003481.1.g00001.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 286aa    MW: 30850.5 Da    PI: 5.1563
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00003481.1.g00001.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.3e-13230282354
                                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH.HHHHHHHHH CS
                          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL.kkeleelkk 54 
                                     + +r++r++kNRe+A rsR+RK+a++ eLe  + +Le eN+ L ++e+e+ ++
  FANhyb_rscf00003481.1.g00001.1 230 AQQRQKRMIKNRESAARSRERKQAYQVELESMAVKLEVENEHLlREEAERTEE 282
                                     679*************************************9863777777766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.3E-7228286IPR004827Basic-leucine zipper domain
PfamPF001707.6E-12230283IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.277230282IPR004827Basic-leucine zipper domain
CDDcd147071.09E-15232272No hitNo description
Gene3DG3DSA:1.20.5.1709.8E-11233282No hitNo description
SuperFamilySSF579599.85E-9233280No hitNo description
PROSITE patternPS000360235250IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MASSKLISSS SSRSRNSDLS RRPKPKPSPP SSPSASANQA LQTTTNGGSY IHTANPAPMT  60
VDGLFRDVYS NTLPPADATL LDAQITLMDS AGTEINSLGA APSRPKTVDE VWEEIVSGES  120
RRECKEELPD EMMTLEDFLA RAGAVEENDV KDLHLAPPPE TERLCGGLSG GMFGFDQIAL  180
SPFPSIEKME GSIAGFGNGA AAAEVAASGG GGRGRGKRAR AVLEPLDKAA QQRQKRMIKN  240
RESAARSRER KQAYQVELES MAVKLEVENE HLLREEAERT EERLKQ
Functional Description ? help Back to Top
Source Description
UniProtBinds to the G-box motif (5'-CCACGTGG-3') of the rbcS-1A gene promoter. G-box and G-box-like motifs are cis-acting elements defined in promoters of certain plant genes which are regulated by such diverse stimuli as light-induction or hormone control. {ECO:0000269|PubMed:8146148}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004290511.11e-140PREDICTED: G-box-binding factor 4-like
SwissprotP427775e-44GBF4_ARATH; G-box-binding factor 4
TrEMBLA0A2P6PRY31e-115A0A2P6PRY3_ROSCH; Putative transcription factor bZIP family
STRINGXP_004290511.11e-140(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20283481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44080.13e-41bZIP family protein