PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00002213.1.g00002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | NF-YB | ||||||||
Protein Properties | Length: 205aa MW: 23474.9 Da PI: 5.6828 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 31.1 | 5.7e-10 | 121 | 152 | 21 | 50 |
NF-YB 21 lPanakis..kdaketvqecvsefisfvtsea 50 l +akis +daket+qecvse+isf+ ++a FANhyb_rscf00002213.1.g00002.1 121 LSPHAKISssDDAKETIQECVSEYISFIMGNA 152 677899953389****************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.20.10 | 1.7E-6 | 121 | 152 | IPR009072 | Histone-fold |
Pfam | PF00808 | 1.8E-4 | 130 | 153 | IPR003958 | Transcription factor CBF/NF-Y/archaeal histone domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046982 | Molecular Function | protein heterodimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence Send to blast |
MHSPHPQRHE QDASNYQQKH LHHIDPSNFK WQCIYVFLVY DANQGSQGRG EELHGRRWCI 60 NKSLDSLYGS HLKEGNCCRT EGCMFPVSVR QTGHKSPLIQ SAFDRFMSIL DSQCDQNDEN 120 LSPHAKISSS DDAKETIQEC VSEYISFIMG NAWLRDVHSL DINRQNSAEG LGFNSLRAEL 180 EEDVSIKDSY MQVAYNNDQG DLQLH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47670.1 | 1e-09 | nuclear factor Y, subunit B6 |