PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00001969.1.g00002.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

Dof

Protein Properties

Length: 307aa MW: 32667.3 Da PI: 9.1056

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00001969.1.g00002.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	124.1	4.7e-39	65	122	3	60
zf-Dof 3 ekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60 +++l+cprCds+ntkfCyynny+l+qPr+fCk+CrryWtkGGalrnvP+Ggg+rknk+ FANhyb_rscf00001969.1.g00002.1 65 SENLRCPRCDSANTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKS 122 57899***************************************************97 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:3.40.50.720	5.4E-4	64	149	IPR016040	NAD(P)-binding domain
ProDom	PD007478	3.0E-25	65	120	IPR003851	Zinc finger, Dof-type
Pfam	PF02701	7.6E-33	67	122	IPR003851	Zinc finger, Dof-type
PROSITE profile	PS50884	29.441	68	122	IPR003851	Zinc finger, Dof-type
PROSITE pattern	PS01361	0	70	106	IPR003851	Zinc finger, Dof-type

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence Send to blast
MIQELFGGAG FNIGGVAGGG GGGAERKISI SSSSTSLSAS PSPSPSSSAT TTTTAAAAAA 60 ATANSENLRC PRCDSANTKF CYYNNYNLTQ PRHFCKTCRR YWTKGGALRN VPIGGGCRKN 120 KSGTISTSIS KTAVAGKMKS MASEIGRSGF GLGFDHEVQA SPILWGSPQN SHILALLRSS 180 TPNPNPNPNV QLCTNSVKEE GGMNMIGSHM MSESSGAGND AMTARSTLGL DPLSSFWRNN 240 QNVQPPHQQQ NGNFILGHEV HSNQGIQELF QRLRSSSSAS YYSHDLQQWS FFIIYFIDFG 300 GGSGCWW

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_004300549.1	1e-154	PREDICTED: dof zinc finger protein DOF3.7-like
TrEMBL	A0A2P6RN67	1e-145	A0A2P6RN67_ROSCH; Putative transcription factor C2C2-Dof family
STRING	XP_004300549.1	1e-153	(Fragaria vesca)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF7219	32	47

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07640.1	2e-32	Dof family protein