PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00001056.1.g00005.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 644aa    MW: 69992.1 Da    PI: 8.9564
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00001056.1.g00005.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.57e-1457106756
                                     HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                                       ++ +NRe+ArrsR+RK+a++  Le+ + +L  eN+aL k+l   + ++
  FANhyb_rscf00001056.1.g00005.1  57 FTKMLSNRESARRSRRRKQAQMTDLETQAGQLRVENSALLKQLTDVNHKY 106
                                     579*************************************9887766655 PP
2bZIP_149.87.4e-16426479356
                                     XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                                     ++kr+rr+ +NRe+ArrsR+RK+a++  Le+ + +L  eN+aL k+l   + ++
  FANhyb_rscf00001056.1.g00005.1 426 DVKRARRMLSNRESARRSRRRKQAQMTDLETQAGQLRVENSALLKQLTDVNHKY 479
                                     68******************************************9887766655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF002901.0E-13460IPR002028Tryptophan synthase, alpha chain
SuperFamilySSF513662.73E-14466IPR011060Ribulose-phosphate binding barrel
Gene3DG3DSA:3.20.20.705.0E-17462IPR013785Aldolase-type TIM barrel
SMARTSM003383.2E-1151115IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.27853107IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.05E-958105No hitNo description
PROSITE patternPS0003605973IPR004827Basic-leucine zipper domain
PfamPF001704.2E-1159107IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.2E-1063105No hitNo description
PfamPF124982.0E-22122237IPR020983Basic leucine-zipper, C-terminal
SMARTSM003385.5E-15424488IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.864426480IPR004827Basic-leucine zipper domain
PfamPF001701.1E-13427480IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.43E-11427478No hitNo description
Gene3DG3DSA:1.20.5.1702.1E-11428478No hitNo description
PROSITE patternPS000360431446IPR004827Basic-leucine zipper domain
PfamPF124983.9E-23495617IPR020983Basic leucine-zipper, C-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006568Biological Processtryptophan metabolic process
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000693Biological Processpositive regulation of seed maturation
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004834Molecular Functiontryptophan synthase activity
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0046982Molecular Functionprotein heterodimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 644 aa     Download sequence    Send to blast
MLATSKPVAV GFGISKPEQA KQVAGWGADG VIVGSAIVKI LGDANTPEEG LKELEIFTKM  60
LSNRESARRS RRRKQAQMTD LETQAGQLRV ENSALLKQLT DVNHKYDNSV VDRRILEANI  120
ETLRAKVKMA EESVKRKTGI NPLLLAMSNV VPRASMASIG NPMDASANSS VPMQPTSNHL  180
FHPVAPNINT PPHHQRLDTT FPGNHSIPLV GNQQRGSNTT EVPSVQHTAS IDHMHQQQLL  240
PGANPCEALP GWNPQIPHQL GDLIALCFQT ASAHSSTSKR EEVDEEVVEI KKPDRLHLNC  300
PLPPPSDPPS TAPINSDQYR ELLKSKLNLA CAAVALTRAS SLKPVDSGNV AQTQSVAPQP  360
SQLTTGLRNK AAGLPQSEAD TSPLGIPALP AIQKKAQTTS GSSKDDSDDD DLEGDIEITE  420
NMDPADVKRA RRMLSNRESA RRSRRRKQAQ MTDLETQAGQ LRVENSALLK QLTDVNHKYD  480
NSVVDRRILE ANIETLRAKV KMAEESVKRK TGINPLLLAM SNVVPRASMA SIGNPMDASA  540
NSSVPMQPTS NHLFHPVAPN INTPPHHQRL DTTFPGNHSI PLVGNQQSVG QPIVRGSNTT  600
EVPSVQHRAS IDHMHQQQLL PGANPCEALP GWNPQIPHQV PKNK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1rd5_A6e-17463200259Tryptophan synthase alpha chain, chloroplast
1rd5_B6e-17463200259Tryptophan synthase alpha chain, chloroplast
1tjr_A5e-17463199258BX1
1tjr_B5e-17463199258BX1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1440447RRSRRRKQ
2442447SRRRKQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004289896.10.0PREDICTED: light-inducible protein CPRF2 isoform X1
TrEMBLA0A2P6PVM50.0A0A2P6PVM5_ROSCH; Putative transcription factor bZIP family
STRINGXP_004289896.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136911825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28770.22e-40bZIP family protein