PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | FANhyb_rscf00000793.1.g00005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
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Family | bZIP | ||||||||
Protein Properties | Length: 243aa MW: 26883.6 Da PI: 8.4524 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 21 | 7.4e-07 | 222 | 242 | 5 | 25 |
CHHHCHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKk 25 +r++r++kNRe+A rsR+RK+ FANhyb_rscf00000793.1.g00005.1 222 RRQKRMIKNRESAARSRARKQ 242 79******************8 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.9E-6 | 211 | 242 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 225 | 240 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009737 | Biological Process | response to abscisic acid | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 243 aa Download sequence Send to blast |
MGIQTMGSQG GADGNCKQSQ FQPLTRQNSI YSLTLDEVQN QLGDLGKPLS SMNLDELLKS 60 VWSAEVNQTM GMDIEGTAMV NQASLQRQAS LSLTSALSKK TVDEVWRDIQ QSKDNEEKRS 120 RERQPTLGEM TLEDFLVKAG VVAEASDKKI LVHPQQSMMG VYMPSQPIPP PMHVGAGAVM 180 DIPYPDNQLA MPSPLMGTLS DTQTPGRKRG NPEDIVEKTV ERRQKRMIKN RESAARSRAR 240 KQV |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00409 | DAP | Transfer from AT3G56850 | Download |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_004306446.1 | 1e-165 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Refseq | XP_011468748.1 | 1e-165 | PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2 isoform X1 | ||||
Swissprot | Q9LES3 | 1e-66 | AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2 | ||||
TrEMBL | A0A2P6SBC6 | 1e-161 | A0A2P6SBC6_ROSCH; Putative transcription factor bZIP family | ||||
STRING | XP_004306446.1 | 1e-165 | (Fragaria vesca) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1320 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56850.1 | 3e-61 | ABA-responsive element binding protein 3 |
Publications ? help Back to Top | |||
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