PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000752.1.g00003.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 424aa    MW: 45931.5 Da    PI: 10.1952
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000752.1.g00003.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1223.5e-07329351527
                                     CHHHCHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkae 27 
                                     +r+rr++kNRe+A rsR+RK+ +
  FANhyb_rscf00000752.1.g00003.1 329 RRQRRMIKNRESAARSRARKQCS 351
                                     79******************966 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1708.0E-12325393No hitNo description
SMARTSM003382.4E-6325407IPR004827Basic-leucine zipper domain
CDDcd147077.10E-20329400No hitNo description
SuperFamilySSF579597.87E-5329353No hitNo description
PROSITE patternPS000360332347IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:1900057Biological Processpositive regulation of leaf senescence
GO:1903648Biological Processpositive regulation of chlorophyll catabolic process
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 424 aa     Download sequence    Send to blast
MGSNINFKNY GDVQNGDVNG GKLGGNFSLA RQTSVYSLTF DEFQNTMGGL GKDFGSMNMD  60
ELLKNIWSAE ETQGITSTSG AGEGNAPVGN LQRQGSLTLP RTLSQKTVDD VWKELNRESG  120
DVKFGNVGGG SDLPQEQRQQ DFGGDDFGGV FGESRGGARR CSRNGKARRN NGLLGSRVES  180
NNNSVPHQSP NLALNVGGVR TSQQQTHQLP PQQQQPIFPK PATLSFAPSM HLVSNAQLTS  240
PRSRGPMSAV VEPSRNTAFS QGGGFPGAGI GMGGLGAGGV TVASRSPVNK ISPDVIVKSS  300
ADTSSLSPIP YMFTRGRKAN GALEKVVERR QRRMIKNRES AARSRARKQC SMTLMCSAAP  360
EVPMYPAYTL ELEAEVQKLK EMNEELQKKQ AEIMEMQKDQ ILETMNREWG GKRQCLRRTL  420
TGPW
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004294799.10.0PREDICTED: bZIP transcription factor TRAB1
RefseqXP_011461478.10.0PREDICTED: bZIP transcription factor TRAB1
TrEMBLA0A2P6PME60.0A0A2P6PME6_ROSCH; Putative transcription factor bZIP family
STRINGXP_004294799.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF19623481
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.21e-50abscisic acid responsive elements-binding factor 3