PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000613.1.g00005.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 655aa    MW: 72231.6 Da    PI: 6.5189
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000613.1.g00005.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.61.5e-09423475557
                                     CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                                     kr++r   NR +A rs +RK  +i eLe kv++L++e ++L  +l  l+  + 
  FANhyb_rscf00000613.1.g00005.1 423 KRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSV 475
                                     9******************************************9999987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.4E-17419483IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.714421484IPR004827Basic-leucine zipper domain
PfamPF001701.2E-8423477IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.08E-11423474No hitNo description
Gene3DG3DSA:1.20.5.1703.1E-9423479No hitNo description
CDDcd147031.27E-24424473No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 655 aa     Download sequence    Send to blast
MGDTEEGNSD MMQRLQSSFG TSSSSILKQP LSMDQLNIPQ FSSSQMRSRH FAQSFTGDTS  60
KRMGIPPSHP NHIPPLSPYS QIPVARPINQ TMGSQNFSPG PSHSRSLSQP AFFSLDSLPP  120
LSPSPYRDSP STSMSEVDVS MEDRDASSHS LLPPSPFGRA NFSRVGESLP PHKAHRRSNS  180
DIPFGFSTMM QQALPPIAPM KGSGSVDLSM SGTEHSGMVK PAQLVKKESS WERAGDNNVE  240
GTGERKSEGE VVDDLFSAYM NLDSIDALNS SGTDDKNSNE NREDMDSSRA SGTKTNCDSS  300
DNEVESSVNE SGGMQRPGLN SLTNSNMREG IKRSAVGDIA PTTRHFRSVS MDSFMGKLQF  360
GDESPKLPPS PGTRPGQLSP SNSIDTDSNA FSLEFGNGEF SGAEMKKIMA NEKLAEIALT  420
DPKRAKRILA NRQSAARSKE RKMRYISELE HKVQTLQTEA TTLSAQLTLL QRDSVGLSNQ  480
NNELKFRLQA MEQQAQLRDD ERCLDGFCHR VMENRCLNNW IAVTSLGQSL PFLILDSGCA  540
LVLWLLSISS FLVKVKMRVL KVATLMILTA LNEALTSEVQ RLKLATTDLN GESHPCKSMI  600
NAQRFQLQQQ SPQTQFNIHQ QQQQQQQQQQ QQQQHQIPQQ LQENGTTTSK PESDQ
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004290316.10.0PREDICTED: transcription factor RF2a
TrEMBLA0A2P6PQ920.0A0A2P6PQ92_ROSCH; Putative transcription factor bZIP family
STRINGXP_004290316.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22723484
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.31e-156bZIP family protein