PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

FANhyb_rscf00000585.1.g00002.1

Organism

Fragaria x ananassa

Taxonomic ID

3747

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria

Family

NZZ/SPL

Protein Properties

Length: 443aa MW: 48173.6 Da PI: 8.1987

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
FANhyb_rscf00000585.1.g00002.1	genome	kazusa	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	21.2	4.7e-07	12	66	38	93
NOZZLE 38 etkksrgrkpgsktaqqkqkkptlrgmgvaklerfiieeekkklvvatvgdtssva 93 + gr sk ++ kqkk rg+gva+le+ ++ee++kk + t + a FANhyb_rscf00000585.1.g00002.1 12 SPTGGFGRSSNSKKTN-KQKKVPQRGLGVAQLEKIRLEEQQKKAASVLSSPTPTPA 66 5566679999999875.6677778******************98766555555444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF08744	9.9E-5	16	57	IPR014855	Plant transcription factor NOZZLE

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence Send to blast
MGVEEKTQQC TSPTGGFGRS SNSKKTNKQK KVPQRGLGVA QLEKIRLEEQ QKKAASVLSS 60 PTPTPASNSL PSPTKSSPCV PNPAPIRHYQ PPSSISFPSL PSLDLPSPNS IFRPPNAEVV 120 RKQQNSVSAV PLPNNGFEIL GHGNVVVPNF WNSNCEYNGA DLNKESSSGI LDPGFAFRPS 180 LNNLPTFDHS NPIWPLPNFQ RTQQFNHQPQ PPPPPPPPSL VNVSSATSLS SSSSVLNFHT 240 EPPSNQSYYS NYTTPMWSEE ERMVGMKRPY PFFQDNDAPS INFKFPTFVA PPMRTDETTS 300 CGNRGGTYNL DPGCNSIFRE GRTCSTSIAE SNSKITIKEN GSVNGDFLTL APPTSNRACP 360 SQKFSFPPGY LAFHNPEVPN FASFPYQGSS EDTIFQPGPS GSNPQQAFYT FIPPARAQLV 420 RPAATINNCN GDVGETVDLN LKL

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence Send to blast

MGVEEKTQQC TSPTGGFGRS SNSKKTNKQK KVPQRGLGVA QLEKIRLEEQ QKKAASVLSS  60
PTPTPASNSL PSPTKSSPCV PNPAPIRHYQ PPSSISFPSL PSLDLPSPNS IFRPPNAEVV  120
RKQQNSVSAV PLPNNGFEIL GHGNVVVPNF WNSNCEYNGA DLNKESSSGI LDPGFAFRPS  180
LNNLPTFDHS NPIWPLPNFQ RTQQFNHQPQ PPPPPPPPSL VNVSSATSLS SSSSVLNFHT  240
EPPSNQSYYS NYTTPMWSEE ERMVGMKRPY PFFQDNDAPS INFKFPTFVA PPMRTDETTS  300
CGNRGGTYNL DPGCNSIFRE GRTCSTSIAE SNSKITIKEN GSVNGDFLTL APPTSNRACP  360
SQKFSFPPGY LAFHNPEVPN FASFPYQGSS EDTIFQPGPS GSNPQQAFYT FIPPARAQLV  420
RPAATINNCN GDVGETVDLN LKL

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011460771.1	0.0	PREDICTED: myb-like protein J
TrEMBL	A0A2P6QA73	0.0	A0A2P6QA73_ROSCH; Putative transcription factor NOZZLE family
STRING	EMJ12826	1e-147	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13