PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID FANhyb_rscf00000435.1.g00004.1
Organism
Fragaria x ananassa
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Potentilleae; Fragariinae; Fragaria
Family bZIP
Protein Properties Length: 320aa    MW: 35234.7 Da    PI: 4.6077
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
FANhyb_rscf00000435.1.g00004.1genomekazusaView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.39.1e-10156198446
                                     XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                          bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                                     +k+ rr  +N+ AA rsR+R+k+++  Le k+k Le+e ++L 
  FANhyb_rscf00000435.1.g00004.1 156 SKKRRRQLRNKDAAMRSRERRKMYVTDLEMKSKYLEGECRRLG 198
                                     6999**********************************98764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.5E-11152213No hitNo description
SMARTSM003380.0058153217IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.461155197IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.38E-10157212No hitNo description
PfamPF001704.2E-8157197IPR004827Basic-leucine zipper domain
CDDcd147046.22E-14158209No hitNo description
PROSITE patternPS000360160175IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MEFEGNLDFL DDGVDVIGEI DWDFVFEDAN GLDSLQKLDN AAVTAAPGAS PSSSSSSTVE  60
DAPANAETGS MDTWIGEVEN MLMKDDDGSK VASEEPPKEY YDNFLAYMLV DSPSTESPTD  120
LDSNSNGSAE SEKEKSGGSP INNDTYADAD ADDPVSKKRR RQLRNKDAAM RSRERRKMYV  180
TDLEMKSKYL EGECRRLGRL LQCCYAENHA LRLSLQMGNA YGRGVSGTKQ ESAVLVMELL  240
LLGSLLWLLD LTCLFTLPLM PHLLLLTLNQ EQAHKALEGV GPRARGGASK MILALQSQSF  300
VKTRRCKASR TKMKYAFLVS
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004300086.10.0PREDICTED: bZIP transcription factor 60
TrEMBLA0A2P6PC031e-164A0A2P6PC03_ROSCH; Putative transcription factor bZIP family
STRINGXP_004300086.10.0(Fragaria vesca)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120093032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.11e-13basic region/leucine zipper motif 60